RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 SYT5O00445 386 aa9□□□□□ -0.97
UBR4-201ENST00000375218 POMCP01189 267 aa9□□□□□ -0.97
UBR4-201ENST00000375218 MC5RP33032 325 aa9□□□□□ -0.97
UBR4-201ENST00000375218 ARHGAP25P42331 645 aa9□□□□□ -0.97
UBR4-201ENST00000375218 SLC1A3P43003 542 aa9□□□□□ -0.97
UBR4-201ENST00000375218 CRYBB1P53674 252 aaPredicted RBP9□□□□□ -0.97
UBR4-201ENST00000375218 NFYCQ13952 458 aa9□□□□□ -0.97
UBR4-201ENST00000375218 HKDC1Q2TB90 917 aa9□□□□□ -0.97
UBR4-201ENST00000375218 FAM47AQ5JRC9 791 aa9□□□□□ -0.97
UBR4-201ENST00000375218 FAM83HQ6ZRV2 1179 aaPredicted RBP9□□□□□ -0.97
UBR4-201ENST00000375218 OR10H4Q8NGA5 316 aa9□□□□□ -0.97
UBR4-201ENST00000375218 OR4D6Q8NGJ1 314 aa9□□□□□ -0.97
UBR4-201ENST00000375218 CPT1CQ8TCG5 803 aa9□□□□□ -0.97
UBR4-201ENST00000375218 LKAAEAR1Q8TD35 194 aa9□□□□□ -0.97
UBR4-201ENST00000375218 C1GALT1C1Q96EU7 318 aa9□□□□□ -0.97
UBR4-201ENST00000375218 KCNS3Q9BQ31 491 aa9□□□□□ -0.97
UBR4-201ENST00000375218 SMURF1Q9HCE7 757 aa9□□□□□ -0.97
UBR4-201ENST00000375218 PDP1Q9P0J1 537 aaPredicted RBP9□□□□□ -0.97
UBR4-201ENST00000375218 PKD2L1Q9P0L9 805 aa9□□□□□ -0.97
UBR4-201ENST00000375218 GINS2Q9Y248 185 aa9□□□□□ -0.97
UBR4-201ENST00000375218 PLXNB2O15031 1838 aa9□□□□□ -0.97
UBR4-201ENST00000375218 CNTNAP5Q8WYK1 1306 aa9□□□□□ -0.97
UBR4-201ENST00000375218 FAM86B1E9PN63 330 aa9□□□□□ -0.97
UBR4-201ENST00000375218 IL18RAPO95256 599 aa9□□□□□ -0.97
UBR4-201ENST00000375218 FAM86B2P0C5J1 330 aa9□□□□□ -0.97
UBR4-201ENST00000375218 GSTM5P46439 218 aa9□□□□□ -0.97
UBR4-201ENST00000375218 UBE2G2P60604 165 aa9□□□□□ -0.97
UBR4-201ENST00000375218 HERVK_113P62684 666 aa9□□□□□ -0.97
UBR4-201ENST00000375218 ERVK-24P63145 666 aa9□□□□□ -0.97
UBR4-201ENST00000375218 CCDC142Q17RM4 750 aa9□□□□□ -0.97
UBR4-201ENST00000375218 DOK7Q18PE1 504 aa9□□□□□ -0.97
UBR4-201ENST00000375218 DTHD1Q6ZMT9 781 aa9□□□□□ -0.97
UBR4-201ENST00000375218 ZBTB33Q86T24 672 aa9□□□□□ -0.97
UBR4-201ENST00000375218 FAM86B1Q8N7N1 296 aa9□□□□□ -0.97
UBR4-201ENST00000375218 FAM181AQ8N9Y4 354 aa9□□□□□ -0.97
UBR4-201ENST00000375218 KHSRPQ92945 711 aaKnown RBP eCLIP9□□□□□ -0.97
UBR4-201ENST00000375218 PTERQ96BW5 349 aa9□□□□□ -0.97
UBR4-201ENST00000375218 ZDHHC12Q96GR4 267 aa9□□□□□ -0.97
UBR4-201ENST00000375218 WDR18Q9BV38 432 aa9□□□□□ -0.97
UBR4-201ENST00000375218 R3HDMLQ9H3Y0 253 aa9□□□□□ -0.97
UBR4-201ENST00000375218 DIABLOQ9NR28 239 aa9□□□□□ -0.97
UBR4-201ENST00000375218 EREGO14944 169 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 PLA2G6O60733 806 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 NDUFS2O75306 463 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 SLCO2B1O94956 709 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 MYF5P13349 255 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 YBX3P16989 372 aaKnown RBP eCLIP8.99□□□□□ -0.971e-8■■□□□ 14.1
UBR4-201ENST00000375218 ZNF135P52742 658 aaPredicted RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 PMS2P3Q13401 168 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 IRF3Q14653 427 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 TOR2AQ5JU69 321 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 OVOS1Q6IE37 1185 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 RTL4Q6ZR62 310 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 SLC24A5Q71RS6 500 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 LONP2Q86WA8 852 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 GLIS1Q8NBF1 620 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 ISG20Q96AZ6 181 aaKnown RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 ZNF274Q96GC6 653 aaPredicted RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 ELF4Q99607 663 aaPredicted RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 DHRS9Q9BPW9 319 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 BPIFA3Q9BQP9 254 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 SEC22CQ9BRL7 303 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 MRPS7Q9Y2R9 242 aaKnown RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 A0A0A6YYC8 382 aaPredicted RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 ATP6V1G2-DDX39BF2Z307 99 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 I3L1I5 382 aaPredicted RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 SLC16A3O15427 465 aaKnown RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 CDK14O94921 469 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 KRT15P19012 456 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 SHMT1P34896 483 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 HNRNPKP61978 463 aaKnown RBP eCLIP8.99□□□□□ -0.97
UBR4-201ENST00000375218 YPEL5P62699 121 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 TUBB4BP68371 445 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 MXRA7P84157 204 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 TNFAIP1Q13829 316 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 KCTD16Q68DU8 428 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 PLEKHA7Q6IQ23 1121 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 TTI2Q6NXR4 508 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 NDUFAF7Q7L592 441 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 MON1AQ86VX9 555 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 AMZ2Q86W34 360 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 RASAL3Q86YV0 1011 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 CYP4X1Q8N118 509 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 KDF1Q8NAX2 398 aaPredicted RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 MLKLQ8NB16 471 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 DPF1Q92782 380 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 TRAPPC9Q96Q05 1148 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 PANX1Q96RD7 426 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 OLFM1Q99784 485 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 KLHL25Q9H0H3 589 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 PCDHA8Q9Y5H6 950 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 NPIPA7E9PJI5 369 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 WWP2O00308 870 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 FOXN1O15353 648 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 CLOCKO15516 846 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 ADAM11O75078 769 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 ASS1P00966 412 aaKnown RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 FABP1P07148 127 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 NPIPA8P0DM63 369 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 BMP2P12643 396 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms