RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PDZD8Q8NEN9 1154 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 DQX1Q8TE96 717 aaKnown RBP11.05□□□□□ -0.64
CCDC40-203ENST00000374877 TSPAN17Q96FV3 270 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 KCNA7Q96RP8 456 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 KCTD14Q9BQ13 255 aaPredicted RBP11.05□□□□□ -0.64
CCDC40-203ENST00000374877 TRMOQ9BU70 441 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 ING2Q9H160 280 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 FAM105AQ9NUU6 356 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 LRRC14BA6NHZ5 514 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 H3BMM5 538 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 BAIAP3O94812 1187 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 LDLRP01130 860 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 ALBP02768 609 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 GPIP06744 558 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 INHBBP09529 407 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 HGFP14210 728 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 CES1P23141 567 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 IGFBP6P24592 240 aaPredicted RBP11.05□□□□□ -0.64
CCDC40-203ENST00000374877 RFC2P35250 354 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 POLR2IP36954 125 aaKnown RBP11.05□□□□□ -0.64
CCDC40-203ENST00000374877 GSK3BP49841 420 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 CLCN5P51795 746 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 FOXA1P55317 472 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 RAB15P59190 212 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 RGS21Q2M5E4 152 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 UNC50Q53HI1 259 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 MINDY1Q8N5J2 469 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 TWIST2Q8WVJ9 160 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC40-203ENST00000374877 VPS33AQ96AX1 596 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 ERLEC1Q96DZ1 483 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 CCDC68Q9H2F9 335 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 ENTPD7Q9NQZ7 604 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 ANAPC2Q9UJX6 822 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 VWA7Q9Y334 891 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 TIMM13Q9Y5L4 95 aaPredicted RBP11.05□□□□□ -0.64
CCDC40-203ENST00000374877 TTC36A6NLP5 189 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 HLA-DQB2P05538 268 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 LINC00032P0C843 101 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 GALNT1Q10472 559 aaPredicted RBP11.05□□□□□ -0.64
CCDC40-203ENST00000374877 UGT3A2Q3SY77 523 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 CCNYL2Q5T2Q4 361 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 KIAA0319Q5VV43 1072 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 FAM117BQ6P1L5 589 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 PTGR2Q8N8N7 351 aaPredicted RBP11.05□□□□□ -0.64
CCDC40-203ENST00000374877 DPF3Q92784 378 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 ADNPQ9H2P0 1102 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 ALG2Q9H553 416 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 CRYL1Q9Y2S2 319 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 GIT1Q9Y2X7 761 aa11.05□□□□□ -0.64
CCDC40-203ENST00000374877 ADAM23O75077 832 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 CD52P31358 61 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 HALP42357 657 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 HLCSP50747 726 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 CDKN2DP55273 166 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 GSTM4Q03013 218 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 CYP2A13Q16696 494 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 C1orf53Q5VUE5 145 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 ABHD8Q96I13 439 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 SMOQ99835 787 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 WDR37Q9Y2I8 494 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 ZFC3H1O60293 1989 aaKnown RBP11.04□□□□□ -0.64
CCDC40-203ENST00000374877 TANC1Q9C0D5 1861 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 CDK14O94921 469 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 F9P00740 461 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 SELPP16109 830 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 NR4A1P22736 598 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 WARSP23381 471 aaKnown RBP11.04□□□□□ -0.64
CCDC40-203ENST00000374877 CCNCP24863 283 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 LIPEQ05469 1076 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 SPIDRQ14159 915 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 TMEM214Q6NUQ4 689 aaKnown RBP11.04□□□□□ -0.64
CCDC40-203ENST00000374877 DCLRE1AQ6PJP8 1040 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 TMEM207Q6UWW9 146 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 KIAA0408Q6ZU52 694 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 ISCA2Q86U28 154 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 TAC4Q86UU9 113 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 CALML6Q8TD86 181 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 SH3RF2Q8TEC5 729 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 PTCD2Q8WV60 388 aaKnown RBP11.04□□□□□ -0.64
CCDC40-203ENST00000374877 MRGPRX2Q96LB1 330 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 UBXN10Q96LJ8 280 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 RNF145Q96MT1 663 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 MUS81Q96NY9 551 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 NSUN5Q96P11 429 aaKnown RBP11.04□□□□□ -0.64
CCDC40-203ENST00000374877 TSGA13Q96PP4 275 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 C1orf50Q9BV19 199 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 CNGB3Q9NQW8 809 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 TMEM30AQ9NV96 361 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 TMEM9Q9P0T7 183 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 WARS2Q9UGM6 360 aaKnown RBP11.04□□□□□ -0.64
CCDC40-203ENST00000374877 GNPTGQ9UJJ9 305 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 TTC24A2A3L6 582 aaPredicted RBP11.04□□□□□ -0.64
CCDC40-203ENST00000374877 PITPNM1O00562 1244 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 AZIN1O14977 448 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 CACNG3O60359 315 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 ESRRBO95718 433 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 DIO3P55073 304 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 HERVK_113P63132 956 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 ITKQ08881 620 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms