RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 PCDHB9Q9Y5E1 797 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 K7ERQ8 282 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 NME4O00746 187 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 COCHO43405 550 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 CLIC3O95833 236 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 CA8P35219 290 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 MAPRE2Q15555 327 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 FBXO22Q8NEZ5 403 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 PRICKLE1Q96MT3 831 aaPredicted RBP16.97■□□□□ 0.31
RXRB-201ENST00000374680 TRAPPC9Q96Q05 1148 aa16.97■□□□□ 0.31
RXRB-201ENST00000374680 CDH23Q9H251 3354 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.96■□□□□ 0.31
RXRB-201ENST00000374680 E5RI56 91 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 INSIG1O15503 277 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 PRLP01236 227 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 HSPA1AP0DMV8 641 aaKnown RBP16.96■□□□□ 0.31
RXRB-201ENST00000374680 HSPA1BP0DMV9 641 aaKnown RBP16.96■□□□□ 0.31
RXRB-201ENST00000374680 MZF1P28698 734 aaPredicted RBP16.96■□□□□ 0.31
RXRB-201ENST00000374680 GGT5P36269 586 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 PLOD1Q02809 727 aaPredicted RBP16.96■□□□□ 0.31
RXRB-201ENST00000374680 CREB5Q02930 508 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 ZNF177Q13360 481 aaPredicted RBP16.96■□□□□ 0.31
RXRB-201ENST00000374680 PLD1Q13393 1074 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 AUTS2Q8WXX7 1259 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 HGH1Q9BTY7 390 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 SEPT3Q9UH03 358 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 DNMT3LQ9UJW3 386 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 SQORQ9Y6N5 450 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 UNC80Q8N2C7 3258 aa16.96■□□□□ 0.31
RXRB-201ENST00000374680 STX7O15400 261 aaKnown RBP16.96■□□□□ 0.3
RXRB-201ENST00000374680 CDH15P55291 814 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 YBEYP58557 167 aaPredicted RBP16.96■□□□□ 0.3
RXRB-201ENST00000374680 UFM1P61960 85 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 IRX1P78414 480 aaPredicted RBP16.96■□□□□ 0.3
RXRB-201ENST00000374680 SATB1Q01826 763 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 SLC5A9Q2M3M2 681 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 NADK2Q4G0N4 442 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 C6orf10Q5SRN2 563 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 LRRC8DQ7L1W4 858 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 MIER2Q8N344 545 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 BBS5Q8N3I7 341 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 GALNT15Q8N3T1 639 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 METTL25Q8N6Q8 603 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 OR52B6Q8NGF0 335 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 STAG3L4Q8TBR4 150 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 RAET1EQ8TD07 263 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 LINGO1Q96FE5 620 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 BTBD9Q96Q07 612 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 TMEM79Q9BSE2 394 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 Q9H521 79 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 TLR9Q9NR96 1032 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 OLA1Q9NTK5 396 aaKnown RBP16.96■□□□□ 0.3
RXRB-201ENST00000374680 ZMYM5Q9UJ78 669 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 NDUFAF1Q9Y375 327 aa16.96■□□□□ 0.3
RXRB-201ENST00000374680 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
RXRB-201ENST00000374680 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 SYN3O14994 580 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 OR4F21O95013 312 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 TFAP2AP05549 437 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 GALTP07902 379 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 SMIM18P0DKX4 95 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 CHRM1P11229 460 aaPredicted RBP16.95■□□□□ 0.3
RXRB-201ENST00000374680 SLC11A2P49281 568 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 RHDQ02161 417 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 RAD51Q06609 339 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 SLC14A2Q15849 920 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 ANKS6Q68DC2 871 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 HMBOX1Q6NT76 420 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 ZBTB49Q6ZSB9 765 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 CLDN19Q8N6F1 224 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 CASD1Q96PB1 797 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 TMEM161AQ9NX61 479 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 EVLQ9UI08 416 aaPredicted RBP16.95■□□□□ 0.3
RXRB-201ENST00000374680 CNOT6Q9ULM6 557 aaKnown RBP16.95■□□□□ 0.3
RXRB-201ENST00000374680 SLC4A7Q9Y6M7 1214 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 CROCCQ5TZA2 2017 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 MOXD2PA6NHM9 499 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 C2orf81A6NN90 581 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 TRIM24O15164 1050 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 SLC22A2O15244 555 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 STAMBPO95630 424 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 ZNF26P17031 533 aaPredicted RBP16.95■□□□□ 0.3
RXRB-201ENST00000374680 SYVN1Q86TM6 617 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 ADCY4Q8NFM4 1077 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 L3HYPDHQ96EM0 354 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 SEPHS2Q99611 448 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 TTPALQ9BTX7 342 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 PDFQ9HBH1 243 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 VWA8A3KMH1 1905 aa16.95■□□□□ 0.3
RXRB-201ENST00000374680 INPP4BO15327 924 aa16.94■□□□□ 0.3
RXRB-201ENST00000374680 PQBP1O60828 265 aaKnown RBP16.94■□□□□ 0.3
RXRB-201ENST00000374680 SP3Q02447 781 aa16.94■□□□□ 0.3
RXRB-201ENST00000374680 RFTN1Q14699 578 aaPredicted RBP16.94■□□□□ 0.3
RXRB-201ENST00000374680 TIGD2Q4W5G0 525 aa16.94■□□□□ 0.3
RXRB-201ENST00000374680 SGO1Q5FBB7 561 aa16.94■□□□□ 0.3
RXRB-201ENST00000374680 SPOUT1Q5T280 376 aaKnown RBP16.94■□□□□ 0.3
RXRB-201ENST00000374680 CWF19L1Q69YN2 538 aaKnown RBP16.94■□□□□ 0.3
RXRB-201ENST00000374680 RALGPS2Q86X27 583 aaPredicted RBP16.94■□□□□ 0.3
RXRB-201ENST00000374680 SLC15A3Q8IY34 581 aa16.94■□□□□ 0.3
RXRB-201ENST00000374680 FUBP1Q96AE4 644 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms