RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 SMARCD2Q92925 531 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TPD52L3Q96J77 140 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 SMAD5Q99717 465 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 BCL2L14Q9BZR8 327 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TMEM9BQ9NQ34 198 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 SNX8Q9Y5X2 465 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 A8MU76 341 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ARHGEF33A8MVX0 844 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 PTGES3LE9PB15 166 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 KHDRBS3O75525 346 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CATP04040 527 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 PRNPP04156 253 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 PCCBP05166 539 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 UMPSP11172 480 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 SDC2P34741 201 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 OC90Q02509 493 aaPredicted RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 GCNT1Q02742 428 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TAF5Q15542 800 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TCHHL1Q5QJ38 904 aaPredicted RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 BTN2A1Q7KYR7 527 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 HIPK1Q86Z02 1210 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ARL14Q8N4G2 192 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 MREGQ8N565 214 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 LRRN4CLQ8ND94 238 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 PSMA8Q8TAA3 256 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 MAPK15Q8TD08 544 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 KLK6Q92876 244 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 DGCR6LQ9BY27 220 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 FAM126AQ9BYI3 521 aaPredicted RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 EPB41L1Q9H4G0 881 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 MAGEL2Q9UJ55 1249 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 EFR3BQ9Y2G0 817 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 PCDHGA4Q9Y5G9 962 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CLUHO75153 1309 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 MATN2O00339 956 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 RAMP2O60895 175 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 MAFO75444 373 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 SNAI1O95863 264 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 IFNGP01579 166 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 JCHAINP01591 159 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 CHRNGP07510 517 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 PAEPP09466 180 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 THRBP10828 461 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 PECAM1P16284 738 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 NR4A1P22736 598 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 ELK3P41970 407 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 PLGLB1Q02325 96 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 RRP1BQ14684 758 aaKnown RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 R3HCC1LQ7Z5L2 792 aaKnown RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 MEIOBQ8N635 442 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 STAG3L4Q8TBR4 150 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 PIWIL2Q8TC59 973 aaKnown RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 ACTL9Q8TC94 416 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 CKAP2Q8WWK9 683 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 ATG4AQ8WYN0 398 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 NELL1Q92832 810 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 TBL1YQ9BQ87 522 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 EDEM2Q9BV94 578 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 STOX2Q9P2F5 926 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 R3HDM2Q9Y2K5 976 aaKnown RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 SLC28A1O00337 649 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 FOXN3O00409 490 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 CHADO15335 359 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 UGT2B11O75310 529 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 SNX4O95219 450 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 ARFIP1P53367 373 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 PLIN5Q00G26 463 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 PARP6Q2NL67 630 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 TRIM61Q5EBN2 209 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 CBWD3Q5JTY5 395 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 CBWD5Q5RIA9 395 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 LYPLAL1Q5VWZ2 237 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 PAGE2Q7Z2X7 111 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 DNAJB7Q7Z6W7 309 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 METTL3Q86U44 580 aaKnown RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 MCEMP1Q8IX19 187 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 FAM98AQ8NCA5 519 aaKnown RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 TATDN2Q93075 761 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 NXPE3Q969Y0 559 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 IGSF21Q96ID5 467 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 KLHL32Q96NJ5 620 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 VPS35Q96QK1 796 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 CBWD1Q9BRT8 395 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 ZCWPW1Q9H0M4 648 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 ABCC13Q9NSE7 274 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 TDP1Q9NUW8 608 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 CAPN6Q9Y6Q1 641 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 ZBTB22O15209 634 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 CLCN5P51795 746 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 TAS2R50P59544 299 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 BMPR2Q13873 1038 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 ZC2HC1CQ53FD0 456 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 CDKAL1Q5VV42 579 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 ZNF776Q68DI1 518 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-202ENST00000374541 PLET1Q6UQ28 207 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 RAB43Q86YS6 212 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 ZNF540Q8NDQ6 660 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 ADCY4Q8NFM4 1077 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 LENG9Q96B70 501 aa6.27□□□□□ -1.41
PTPN3-202ENST00000374541 TMEM176AQ96HP8 235 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms