RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 EVLQ9UI08 416 aaPredicted RBP15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 MYOFQ9NZM1 2061 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 TANC1Q9C0D5 1861 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 MNX1P50219 401 aaPredicted RBP15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 EPHB3P54753 998 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 RAD51Q06609 339 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 PTK2BQ14289 1009 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 KIF19Q2TAC6 998 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 TPGS2Q68CL5 300 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 UGT3A1Q6NUS8 523 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 FAM151BQ6UXP7 276 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 RAB44Q7Z6P3 723 aaPredicted RBP15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 MFN1Q8IWA4 741 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 TWIST2Q8WVJ9 160 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 FAR2Q96K12 515 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 MRPL1Q9BYD6 325 aaKnown RBP15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 GPR63Q9BZJ6 419 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 TUBB1Q9H4B7 451 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 ARIH1Q9Y4X5 557 aaPredicted RBP15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 DPPA5A6NC42 116 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 E7ENX8 843 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 GREM1O60565 184 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 SMNDC1O75940 238 aaKnown RBP eCLIP15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 CSF2RAP15509 400 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 AQP4P55087 323 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 ARHGEF6Q15052 776 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 ARMC3Q5W041 872 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 REP15Q6BDI9 236 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 CNKSR3Q6P9H4 555 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 LARP4Q71RC2 724 aaKnown RBP eCLIP15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 TTC30BQ8N4P2 665 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 FUBP1Q96AE4 644 aaKnown RBP15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 LINGO1Q96FE5 620 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 SERPINI1Q99574 410 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 IL21Q9HBE4 155 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 DLGAP2Q9P1A6 1054 aa15.89■□□□□ 0.13
CNKSR1-202ENST00000374253 AZIN1O14977 448 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 PKMP14618 531 aaKnown RBP15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 PSME3P61289 254 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 SATB1Q01826 763 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 SQLEQ14534 574 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 C18orf21Q32NC0 220 aaPredicted RBP15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 GRAMD1BQ3KR37 738 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 ISLR2Q6UXK2 745 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 GAREM2Q75VX8 874 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 BBS7Q8IWZ6 715 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 CLYBLQ8N0X4 340 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 STAG3L4Q8TBR4 150 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 JADE3Q92613 823 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 KIAA1191Q96A73 305 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 MIEF2Q96C03 454 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 TRMT2BQ96GJ1 504 aaKnown RBP15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 LRCH3Q96II8 777 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 TFB2MQ9H5Q4 396 aaKnown RBP15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 CACNA2D2Q9NY47 1150 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 PRPF19Q9UMS4 504 aaKnown RBP15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 E5RI56 91 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 KERAO60938 352 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 ZCCHC18P0CG32 403 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 NFKB2Q00653 900 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 CLCQ05315 142 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 RAB33AQ14088 237 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 HERC3Q15034 1050 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 CDK15Q96Q40 435 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 BOCQ9BWV1 1114 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 TRIM8Q9BZR9 551 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 ABCG8Q9H221 673 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 SYTL2Q9HCH5 934 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 BATF3Q9NR55 127 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 CFAP97Q9P2B7 532 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 TRMT6Q9UJA5 497 aaKnown RBP15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 PCDHGA7Q9Y5G6 932 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 OR51B4Q9Y5P0 310 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 AK5Q9Y6K8 562 aa15.88■□□□□ 0.13
CNKSR1-202ENST00000374253 LCHNA4D1U4 455 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 SLC22A2O15244 555 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 DNAJA2O60884 412 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 VPS26AO75436 327 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 TSPAN12O95859 305 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 ME2P23368 584 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 ARL1P40616 181 aaPredicted RBP15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 HK3P52790 923 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 INHBCP55103 352 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 SPATA24Q86W54 205 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 CLDN19Q8N6F1 224 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 HJURPQ8NCD3 748 aaPredicted RBP15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 CD200R1Q8TD46 325 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 TUBGCP3Q96CW5 907 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 KLHL32Q96NJ5 620 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 ACOX2Q99424 681 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 TRMOQ9BU70 441 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 DERL2Q9GZP9 239 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 COPS7BQ9H9Q2 264 aaPredicted RBP15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 SPG21Q9NZD8 308 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 RIMKLBQ9ULI2 386 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 CORO1CQ9ULV4 474 aaPredicted RBP15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 ZNF711Q9Y462 761 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 A0A1W2PRU2 124 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 NR5A2O00482 541 aa15.87■□□□□ 0.13
CNKSR1-202ENST00000374253 CRCPO75575 148 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms