RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 LINC00854A0A1B0GVQ3 168 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 YJEFN3A6XGL0 299 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 UBXN8O00124 270 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 ACKR2O00590 384 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 AP3D1O14617 1153 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 ENPP3O14638 875 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 GUCY1B2O75343 617 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 GMNNO75496 209 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 PRSS23O95084 383 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 DNTTP04053 509 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 S100BP04271 92 aaPredicted RBP5.4□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF286BP0CG31 522 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 HSPA1AP0DMV8 641 aaKnown RBP5.4□□□□□ -1.55
ATG4A-204ENST00000372246 HSPA1BP0DMV9 641 aaKnown RBP5.4□□□□□ -1.55
ATG4A-204ENST00000372246 MLNP12872 115 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 GFAPP14136 432 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 HGFP14210 728 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF12P17014 697 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 HRH2P25021 359 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 FMO3P31513 532 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 DGKQP52824 942 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 SLC12A2P55011 1212 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 MAP3K7CLP57077 242 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 RPS3AP61247 264 aaKnown RBP5.4□□□□□ -1.55
ATG4A-204ENST00000372246 UFM1P61960 85 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 OCA2Q04671 838 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 LIPEQ05469 1076 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 STX5Q13190 355 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 OXA1LQ15070 435 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 AGERQ15109 404 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 PTPRRQ15256 657 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 ADPRMQ3LIE5 342 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 SAMD4BQ5PRF9 694 aaKnown RBP5.4□□□□□ -1.55
ATG4A-204ENST00000372246 ENPP6Q6UWR7 440 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 SLC26A9Q7LBE3 791 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 CATSPER4Q7RTX7 472 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 TMEM179BQ7Z7N9 219 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 GALNT10Q86SR1 603 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 TMEM126BQ8IUX1 230 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 KIAA2013Q8IYS2 634 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 SPARTQ8N0X7 666 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 MIER2Q8N344 545 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 RDM1Q8NG50 284 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 FBXO30Q8TB52 745 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 TRPC4APQ8TEL6 797 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 SEPT8Q92599 483 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 ISL2Q96A47 359 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 BIRC7Q96CA5 298 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 TUBGCP3Q96CW5 907 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 B3GALT6Q96L58 329 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 NSMCE3Q96MG7 304 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 PPM1MQ96MI6 270 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 TSNARE1Q96NA8 513 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 CYP2S1Q96SQ9 504 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 UHRF1Q96T88 793 aaPredicted RBP5.4□□□□□ -1.55
ATG4A-204ENST00000372246 DOK1Q99704 481 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 OCSTAMPQ9BR26 566 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 MRIQ9BWK5 157 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 CHID1Q9BWS9 393 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 AMBRA1Q9C0C7 1298 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 CEP44Q9C0F1 390 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 RSPH9Q9H1X1 276 aaPredicted RBP5.4□□□□□ -1.55
ATG4A-204ENST00000372246 ABCG8Q9H221 673 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 FZD8Q9H461 694 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 TOR3AQ9H497 397 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 GSTO2Q9H4Y5 243 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 RUBCNLQ9H714 662 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 MID1IP1Q9NPA3 183 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 CASS4Q9NQ75 786 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 NRBP2Q9NSY0 501 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 SCHIP1Q9P0W5 487 aaPredicted RBP5.4□□□□□ -1.55
ATG4A-204ENST00000372246 MTRRQ9UBK8 725 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 FKBPLQ9UIM3 349 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 IKZF3Q9UKT9 509 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 ASB1Q9Y576 335 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 EVPLQ92817 2033 aa5.4□□□□□ -1.55
ATG4A-204ENST00000372246 COL11A2P13942 1736 aaPredicted RBP5.39□□□□□ -1.55
ATG4A-204ENST00000372246 TRIM64CA6NLI5 447 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 ERI2A8K979 691 aaKnown RBP5.39□□□□□ -1.55
ATG4A-204ENST00000372246 EIF3FO00303 357 aaPredicted RBP5.39□□□□□ -1.55
ATG4A-204ENST00000372246 SNAP91O60641 907 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 DIRAS1O95057 198 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 RASAL1O95294 804 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 NADKO95544 446 aaPredicted RBP5.39□□□□□ -1.55
ATG4A-204ENST00000372246 GOT2P00505 430 aaKnown RBP5.39□□□□□ -1.55
ATG4A-204ENST00000372246 FYNP06241 537 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 MBL2P11226 248 aaPredicted RBP5.39□□□□□ -1.55
ATG4A-204ENST00000372246 PSMA4P25789 261 aaKnown RBP5.39□□□□□ -1.55
ATG4A-204ENST00000372246 RFC2P35250 354 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 ARL1P40616 181 aaPredicted RBP5.39□□□□□ -1.55
ATG4A-204ENST00000372246 PGFP49763 221 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 AGTR2P50052 363 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 ARSDP51689 593 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 NFYCQ13952 458 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 SQLEQ14534 574 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 IHHQ14623 411 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 RFTN1Q14699 578 aaPredicted RBP5.39□□□□□ -1.55
ATG4A-204ENST00000372246 PFKFB4Q16877 469 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 KCTD11Q693B1 232 aa5.39□□□□□ -1.55
ATG4A-204ENST00000372246 GTF2IRD2BQ6EKJ0 949 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms