RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 MT-CO3P00414 261 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 ATP1A1P05023 1023 aaKnown RBP19.86■□□□□ 0.77
TMEM53-205ENST00000372244 STIP1P31948 543 aaKnown RBP19.86■□□□□ 0.77
TMEM53-205ENST00000372244 CTBSQ01459 385 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 PRPSAP1Q14558 356 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 PARP6Q2NL67 630 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 PERM1Q5SV97 790 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 DOK6Q6PKX4 331 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 C17orf82Q86X59 251 aaPredicted RBP19.86■□□□□ 0.77
TMEM53-205ENST00000372244 TRAM1L1Q8N609 369 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 PDCD7Q8N8D1 485 aaKnown RBP19.86■□□□□ 0.77
TMEM53-205ENST00000372244 KYQ8NBH2 561 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 RTP4Q96DX8 246 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 PPP1R2P1Q96PQ5 205 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 PLEKHG4BQ96PX9 1271 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 TMEM121Q9BTD3 319 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 SPATA16Q9BXB7 569 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 GSDMCQ9BYG8 508 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 FRMD8P1Q9BZ68 369 aaPredicted RBP19.86■□□□□ 0.77
TMEM53-205ENST00000372244 ABCG4Q9H172 646 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 ARNT2Q9HBZ2 717 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 SIRPGQ9P1W8 387 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 CLCA2Q9UQC9 943 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 TRABD2BA6NFA1 517 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 GDF10P55107 478 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 ILF3Q12906 894 aaKnown RBP eCLIP19.86■□□□□ 0.77
TMEM53-205ENST00000372244 OASLQ15646 514 aaKnown RBP19.86■□□□□ 0.77
TMEM53-205ENST00000372244 SEL1L2Q5TEA6 688 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 KCTD11Q693B1 232 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 DENND5AQ6IQ26 1287 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 SFTPA2Q8IWL1 248 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 OR6C4Q8NGE1 309 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 MAPK15Q8TD08 544 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 FICDQ9BVA6 458 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 DPEP2Q9H4A9 486 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 BPIFA1Q9NP55 256 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 IL26Q9NPH9 171 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 TAAR2Q9P1P5 351 aa19.86■□□□□ 0.77
TMEM53-205ENST00000372244 APC2O95996 2303 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 LIASO43766 372 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 METTL18O95568 372 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 AK4P27144 223 aaPredicted RBP19.85■□□□□ 0.77
TMEM53-205ENST00000372244 OLIG2Q13516 323 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 ZDHHC20Q5W0Z9 365 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 ALS2CLQ60I27 953 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 BLOC1S5Q8TDH9 187 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 ATG4AQ8WYN0 398 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 GLYATL1Q969I3 302 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 OR2M4Q96R27 311 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 RMI1Q9H9A7 625 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 TRIM39Q9HCM9 518 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.85■□□□□ 0.77
TMEM53-205ENST00000372244 TMPRSS11EQ9UL52 423 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 PLEKHM1Q9Y4G2 1056 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 GPSM3Q9Y4H4 160 aa19.85■□□□□ 0.77
TMEM53-205ENST00000372244 PCYT1BQ9Y5K3 369 aaPredicted RBP19.85■□□□□ 0.77
TMEM53-205ENST00000372244 ACACAQ13085 2346 aa19.84■□□□□ 0.77
TMEM53-205ENST00000372244 PPFIA2O75334 1257 aa19.84■□□□□ 0.77
TMEM53-205ENST00000372244 SLC25A14O95258 325 aaPredicted RBP19.84■□□□□ 0.77
TMEM53-205ENST00000372244 ASMTLO95671 621 aa19.84■□□□□ 0.77
TMEM53-205ENST00000372244 LRP8Q14114 963 aa19.84■□□□□ 0.77
TMEM53-205ENST00000372244 HLTFQ14527 1009 aaKnown RBP eCLIP19.84■□□□□ 0.77
TMEM53-205ENST00000372244 CERCAMQ5T4B2 595 aa19.84■□□□□ 0.77
TMEM53-205ENST00000372244 ARHGEF18Q6ZSZ5 1173 aa19.84■□□□□ 0.77
TMEM53-205ENST00000372244 MARK2Q7KZI7 788 aaKnown RBP19.84■□□□□ 0.77
TMEM53-205ENST00000372244 GLT6D1Q7Z4J2 308 aa19.84■□□□□ 0.77
TMEM53-205ENST00000372244 SUDS3Q9H7L9 328 aaPredicted RBP19.84■□□□□ 0.77
TMEM53-205ENST00000372244 DKK4Q9UBT3 224 aa19.84■□□□□ 0.77
TMEM53-205ENST00000372244 RABGEF1Q9UJ41 708 aa19.84■□□□□ 0.77
TMEM53-205ENST00000372244 APPL1Q9UKG1 709 aa19.84■□□□□ 0.77
TMEM53-205ENST00000372244 CACNA1BQ00975 2339 aa19.83■□□□□ 0.77
TMEM53-205ENST00000372244 NUAK1O60285 661 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 SLC4A1P02730 911 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 PNLIPP16233 465 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 GLB1P16278 677 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 SIX1Q15475 284 aaPredicted RBP19.83■□□□□ 0.76
TMEM53-205ENST00000372244 C14orf28Q4W4Y0 310 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 ZNF569Q5MCW4 686 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 GALNT13Q8IUC8 556 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 BRSK1Q8TDC3 778 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 VPS35Q96QK1 796 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 APOL2Q9BQE5 337 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 CCDC3Q9BQI4 270 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 ATXN10Q9UBB4 475 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 ZNHIT2Q9UHR6 403 aa19.83■□□□□ 0.76
TMEM53-205ENST00000372244 ANKRD11Q6UB99 2663 aaPredicted RBP19.82■□□□□ 0.76
TMEM53-205ENST00000372244 GPR89AB7ZAQ6 455 aa19.82■□□□□ 0.76
TMEM53-205ENST00000372244 NTN3O00634 580 aaPredicted RBP19.82■□□□□ 0.76
TMEM53-205ENST00000372244 CHUKO15111 745 aa19.82■□□□□ 0.76
TMEM53-205ENST00000372244 CASC3O15234 703 aaKnown RBP19.82■□□□□ 0.76
TMEM53-205ENST00000372244 GPR89BP0CG08 455 aa19.82■□□□□ 0.76
TMEM53-205ENST00000372244 ZNF8P17098 575 aaPredicted RBP19.82■□□□□ 0.76
TMEM53-205ENST00000372244 PEX6Q13608 980 aa19.82■□□□□ 0.76
TMEM53-205ENST00000372244 TAF1AQ15573 450 aaPredicted RBP19.82■□□□□ 0.76
TMEM53-205ENST00000372244 ST3GAL2Q16842 350 aa19.82■□□□□ 0.76
TMEM53-205ENST00000372244 ATP13A5Q4VNC0 1218 aa19.82■□□□□ 0.76
TMEM53-205ENST00000372244 SLC30A9Q6PML9 568 aa19.82■□□□□ 0.76
TMEM53-205ENST00000372244 ADGRG6Q86SQ4 1221 aa19.82■□□□□ 0.76
TMEM53-205ENST00000372244 WDR48Q8TAF3 677 aa19.82■□□□□ 0.76
TMEM53-205ENST00000372244 ZDHHC1Q8WTX9 485 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms