RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 IL1BP01584 269 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 PYGLP06737 847 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 CCDC166P0CW27 439 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 ALDH3A1P30838 453 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 PDAP1Q13442 181 aaKnown RBP26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 CSHL1Q14406 222 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 PCLAFQ15004 111 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 LRRC8EQ6NSJ5 796 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 CHPFQ8IZ52 775 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 RBFAQ8N0V3 343 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 PPP1R14CQ8TAE6 165 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 ACOX2Q99424 681 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 CDH19Q9H159 772 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 DYRK4Q9NR20 520 aa26.14■■□□□ 1.77
ATPAF1-202ENST00000371937 RGSL1A5PLK6 1076 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 GOLGA8CPA6NN73 597 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 GPR39O43194 453 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 ACRV1P26436 265 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 MMP12P39900 470 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 DLG1Q12959 904 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 ITGA9Q13797 1035 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 FBXL19Q6PCT2 694 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 FSTL5Q8N475 847 aaPredicted RBP26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 ZNF513Q8N8E2 541 aaPredicted RBP26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 HEXDCQ8WVB3 486 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 MRPL57Q9BQC6 102 aaKnown RBP26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 TSSK1BQ9BXA7 367 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 SYTL2Q9HCH5 934 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 IGSF5Q9NSI5 407 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 TICRRQ7Z2Z1 1910 aa26.13■■□□□ 1.77
ATPAF1-202ENST00000371937 TCF20Q9UGU0 1960 aaKnown RBP26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 SPECC1L-ADORA2AF8WAN1 911 aa26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 VPS26AO75436 327 aa26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 CTHP32929 405 aa26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 GLRBP48167 497 aa26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 TIAL1Q01085 375 aaKnown RBP eCLIP26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 ELP6Q0PNE2 266 aa26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 FAM46CQ5VWP2 391 aa26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 PIM3Q86V86 326 aa26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 CACNA2D3Q8IZS8 1091 aa26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 SEC16BQ96JE7 1060 aa26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 CLPBQ9H078 707 aa26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 P2RY12Q9H244 342 aa26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 MRPL46Q9H2W6 279 aaKnown RBP26.12■■□□□ 1.77
ATPAF1-202ENST00000371937 ERICH4A6NGS2 130 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 SNX3O60493 162 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 MYL2P10916 166 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 UGT1A6P19224 532 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 UGT1A1P22309 533 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 UGT1A4P22310 534 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 KCNA4P22459 653 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 RPS3P23396 243 aaKnown RBP eCLIP26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 UGT1A3P35503 534 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 UGT1A5P35504 534 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 SKIV2L2P42285 1042 aaKnown RBP26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 DCDC1P59894 354 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 RALGDSQ12967 914 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 ACAP2Q15057 778 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 RALGPS2Q86X27 583 aaPredicted RBP26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 C10orf107Q8IVU9 208 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 NXPE1Q8N323 547 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 DTX3LQ8TDB6 740 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 KCNJ9Q92806 393 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 ULK4Q96C45 1275 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 KCNK12Q9HB15 430 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 CPSF2Q9P2I0 782 aaKnown RBP26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 G3V2L1 256 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 H0Y858 1186 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 K7EQS6 105 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 PSMD11O00231 422 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 SKIV2LQ15477 1246 aaKnown RBP26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 HSD11B1LQ7Z5J1 315 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 MMAAQ8IVH4 418 aaKnown RBP26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 RAVER1Q8IY67 606 aaKnown RBP26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 SPATA6LQ8N4H0 392 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 TMEM151AQ8N4L1 468 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 ANKS4BQ8N8V4 417 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 ARRDC3Q96B67 414 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 LRCH3Q96II8 777 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 FAM83DQ9H4H8 585 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 C8orf33Q9H7E9 229 aaPredicted RBP26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 ZDHHC4Q9NPG8 344 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 NFKBIL1Q9UBC1 381 aaPredicted RBP26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 LIMD1Q9UGP4 676 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 FAM50BQ9Y247 325 aa26.11■■□□□ 1.77
ATPAF1-202ENST00000371937 RBP1P09455 135 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 ELFN1P0C7U0 828 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 ZNF37AP17032 561 aaPredicted RBP26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 GRK2P25098 689 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 BST1Q10588 318 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 STX3Q13277 289 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 CCDC85BQ15834 202 aaPredicted RBP26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 CTSL3PQ5NE16 218 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 UGT3A1Q6NUS8 523 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 TMEM207Q6UWW9 146 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 ZYG11AQ6WRX3 759 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 OTOAQ7RTW8 1153 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 SPATA21Q7Z572 469 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 SLC44A3Q8N4M1 653 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 CCDC197Q8NCU1 140 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms