RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CYP2S1Q96SQ9 504 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 SEMA4BQ9NPR2 832 aaPredicted RBP28.77■■■□□ 2.2
SSBP3-204ENST00000371320 GIMAP2Q9UG22 337 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 YIPF1Q9Y548 306 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 ANKRD36A6QL64 1941 aa28.77■■■□□ 2.2
SSBP3-204ENST00000371320 RNF168Q8IYW5 571 aaPredicted RBP28.76■■■□□ 2.19
SSBP3-204ENST00000371320 ADCY4Q8NFM4 1077 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 SLC30A3Q99726 388 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 TUBB1Q9H4B7 451 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 HSFX1Q9UBD0 423 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 TRMT6Q9UJA5 497 aaKnown RBP28.76■■■□□ 2.19
SSBP3-204ENST00000371320 PRORSD1PA6NEY8 169 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 H0Y626 953 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 CRCPO75575 148 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 NME5P56597 212 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 TRAP1Q12931 704 aaKnown RBP28.76■■■□□ 2.19
SSBP3-204ENST00000371320 GRB7Q14451 532 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 PDK3Q15120 406 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 PTPRRQ15256 657 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 DEFB115Q30KQ5 88 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 NCEH1Q6PIU2 408 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 MFN1Q8IWA4 741 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 CARNMT1Q8N4J0 409 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 PCYOX1LQ8NBM8 494 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 TUBGCP3Q96CW5 907 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 GBP5Q96PP8 586 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 TMEM181Q9P2C4 612 aa28.76■■■□□ 2.19
SSBP3-204ENST00000371320 A0A0J9YYE9 177 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 MAP3K13O43283 966 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 NIPSNAP2O75323 286 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 LINC00032P0C843 101 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 FBXO48Q5FWF7 155 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 SAMD4BQ5PRF9 694 aaKnown RBP28.75■■■□□ 2.19
SSBP3-204ENST00000371320 C8orf82Q6P1X6 216 aaPredicted RBP28.75■■■□□ 2.19
SSBP3-204ENST00000371320 ZNF783Q6ZMS7 281 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 DEFB128Q7Z7B8 93 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 PHYKPLQ8IUZ5 450 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 MIER2Q8N344 545 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 SIDT2Q8NBJ9 832 aaKnown RBP28.75■■■□□ 2.19
SSBP3-204ENST00000371320 ROPN1LQ96C74 230 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 HACD3Q9P035 362 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 CD300AQ9UGN4 299 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 BTRCQ9Y297 605 aa28.75■■■□□ 2.19
SSBP3-204ENST00000371320 NCF1BA6NI72 391 aaPredicted RBP28.74■■■□□ 2.19
SSBP3-204ENST00000371320 BBIP1A8MTZ0 92 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 NCF1CA8MVU1 366 aaPredicted RBP28.74■■■□□ 2.19
SSBP3-204ENST00000371320 TBL1XO60907 577 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 NCF1P14598 390 aaPredicted RBP28.74■■■□□ 2.19
SSBP3-204ENST00000371320 LBPP18428 481 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 VEPH1Q14D04 833 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 TPGS2Q68CL5 300 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 FBXL19Q6PCT2 694 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.74■■■□□ 2.19
SSBP3-204ENST00000371320 TTC30BQ8N4P2 665 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 TRMT2BQ96GJ1 504 aaKnown RBP28.74■■■□□ 2.19
SSBP3-204ENST00000371320 NR5A2O00482 541 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 CXCL10P02778 98 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 C8BP07358 591 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 RPS17P08708 135 aaKnown RBP28.74■■■□□ 2.19
SSBP3-204ENST00000371320 MZF1P28698 734 aaPredicted RBP28.74■■■□□ 2.19
SSBP3-204ENST00000371320 TWF1Q12792 350 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 CTSL3PQ5NE16 218 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 ST13P4Q8IZP2 240 aaPredicted RBP28.74■■■□□ 2.19
SSBP3-204ENST00000371320 ATP6V1E2Q96A05 226 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 HIPK3Q9H422 1215 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 POLG2Q9UHN1 485 aa28.74■■■□□ 2.19
SSBP3-204ENST00000371320 A0A1B0GTL3 188 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 STX16O14662 325 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 RNASEH2AO75792 299 aaKnown RBP28.73■■■□□ 2.19
SSBP3-204ENST00000371320 MBL2P11226 248 aaPredicted RBP28.73■■■□□ 2.19
SSBP3-204ENST00000371320 PIM1P11309 404 aaPredicted RBP28.73■■■□□ 2.19
SSBP3-204ENST00000371320 AARS2Q5JTZ9 985 aaKnown RBP28.73■■■□□ 2.19
SSBP3-204ENST00000371320 IL23RQ5VWK5 629 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 TICAM1Q8IUC6 712 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 TRAPPC9Q96Q05 1148 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 Q9H521 79 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 LHX3Q9UBR4 397 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 A0A0U1RQS6 177 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 SCAMP3O14828 347 aaKnown RBP28.73■■■□□ 2.19
SSBP3-204ENST00000371320 VPS4BO75351 444 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 TSPAN12O95859 305 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 HGFP14210 728 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 CHRM3P20309 590 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 CD9P21926 228 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 IL2P60568 153 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 NAA20P61599 178 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 SMAD3P84022 425 aaKnown RBP28.73■■■□□ 2.19
SSBP3-204ENST00000371320 INO80DQ53TQ3 878 aaPredicted RBP28.73■■■□□ 2.19
SSBP3-204ENST00000371320 FOXB2Q5VYV0 432 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 TXNDC11Q6PKC3 985 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 TAS2R42Q7RTR8 314 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 RIN3Q8TB24 985 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 EEF1AKMT1Q8WVE0 214 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 FAM192AQ9GZU8 254 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 STOML2Q9UJZ1 356 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 AP4S1Q9Y587 144 aa28.73■■■□□ 2.19
SSBP3-204ENST00000371320 DENRO43583 198 aaKnown RBP28.72■■■□□ 2.19
SSBP3-204ENST00000371320 KLK8O60259 260 aa28.72■■■□□ 2.19
SSBP3-204ENST00000371320 CLCN4P51793 760 aa28.72■■■□□ 2.19
SSBP3-204ENST00000371320 SLC7A2P52569 658 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms