RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ELOVL2Q9NXB9 296 aa8.8□□□□□ -1
SNX27-201ENST00000368838 EIF2B4Q9UI10 523 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 DNMT3AQ9Y6K1 912 aaPredicted RBP8.8□□□□□ -1
SNX27-201ENST00000368838 CBX4O00257 560 aa8.79□□□□□ -1
SNX27-201ENST00000368838 TRAFD1O14545 582 aaPredicted RBP8.79□□□□□ -1
SNX27-201ENST00000368838 NPC1O15118 1278 aa8.79□□□□□ -1
SNX27-201ENST00000368838 TM9SF1O15321 606 aa8.79□□□□□ -1
SNX27-201ENST00000368838 TYROBPO43914 113 aa8.79□□□□□ -1
SNX27-201ENST00000368838 ZNF821O75541 412 aaPredicted RBP8.79□□□□□ -1
SNX27-201ENST00000368838 SYPP08247 313 aa8.79□□□□□ -1
SNX27-201ENST00000368838 CD9P21926 228 aa8.79□□□□□ -1
SNX27-201ENST00000368838 HOXD12P35452 270 aa8.79□□□□□ -1
SNX27-201ENST00000368838 MDH1P40925 334 aaKnown RBP8.79□□□□□ -1
SNX27-201ENST00000368838 CCNFP41002 786 aa8.79□□□□□ -1
SNX27-201ENST00000368838 CD86P42081 329 aa8.79□□□□□ -1
SNX27-201ENST00000368838 DPP6P42658 865 aa8.79□□□□□ -1
SNX27-201ENST00000368838 GRIA4P48058 902 aa8.79□□□□□ -1
SNX27-201ENST00000368838 COPAP53621 1224 aa8.79□□□□□ -1
SNX27-201ENST00000368838 DSC2Q02487 901 aa8.79□□□□□ -1
SNX27-201ENST00000368838 INSCQ1MX18 579 aa8.79□□□□□ -1
SNX27-201ENST00000368838 FNDC3BQ53EP0 1204 aaKnown RBP8.79□□□□□ -1
SNX27-201ENST00000368838 PITRM1Q5JRX3 1037 aa8.79□□□□□ -1
SNX27-201ENST00000368838 WDR45BQ5MNZ6 344 aa8.79□□□□□ -1
SNX27-201ENST00000368838 SYCP2LQ5T4T6 812 aa8.79□□□□□ -1
SNX27-201ENST00000368838 TEDDM1Q5T9Z0 273 aa8.79□□□□□ -1
SNX27-201ENST00000368838 LAYNQ6UX15 382 aa8.79□□□□□ -1
SNX27-201ENST00000368838 RGS9BPQ6ZS82 235 aa8.79□□□□□ -1
SNX27-201ENST00000368838 SRLQ86TD4 932 aa8.79□□□□□ -1
SNX27-201ENST00000368838 ADIPOR2Q86V24 386 aa8.79□□□□□ -1
SNX27-201ENST00000368838 MARCH9Q86YJ5 346 aa8.79□□□□□ -1
SNX27-201ENST00000368838 NETO2Q8NC67 525 aa8.79□□□□□ -1
SNX27-201ENST00000368838 PPHLN1Q8NEY8 458 aaKnown RBP8.79□□□□□ -1
SNX27-201ENST00000368838 IPMKQ8NFU5 416 aa8.79□□□□□ -1
SNX27-201ENST00000368838 WFDC5Q8TCV5 224 aa8.79□□□□□ -1
SNX27-201ENST00000368838 STYXQ8WUJ0 223 aa8.79□□□□□ -1
SNX27-201ENST00000368838 UCMAQ8WVF2 138 aa8.79□□□□□ -1
SNX27-201ENST00000368838 SIPA1Q96FS4 1042 aa8.79□□□□□ -1
SNX27-201ENST00000368838 CABS1Q96KC9 395 aa8.79□□□□□ -1
SNX27-201ENST00000368838 ZNF641Q96N77 438 aaPredicted RBP8.79□□□□□ -1
SNX27-201ENST00000368838 TCF12Q99081 682 aa8.79□□□□□ -1
SNX27-201ENST00000368838 SPON2Q9BUD6 331 aa8.79□□□□□ -1
SNX27-201ENST00000368838 C6orf106Q9H6K1 298 aaPredicted RBP8.79□□□□□ -1
SNX27-201ENST00000368838 NOD2Q9HC29 1040 aa8.79□□□□□ -1
SNX27-201ENST00000368838 MAGEE1Q9HCI5 957 aa8.79□□□□□ -1
SNX27-201ENST00000368838 ITM2CQ9NQX7 267 aa8.79□□□□□ -1
SNX27-201ENST00000368838 WSB2Q9NYS7 404 aaPredicted RBP8.79□□□□□ -1
SNX27-201ENST00000368838 GGA2Q9UJY4 613 aa8.79□□□□□ -1
SNX27-201ENST00000368838 CORO1CQ9ULV4 474 aaPredicted RBP8.79□□□□□ -1
SNX27-201ENST00000368838 MAD1L1Q9Y6D9 718 aa8.79□□□□□ -1
SNX27-201ENST00000368838 IKBKGQ9Y6K9 419 aa8.79□□□□□ -1
SNX27-201ENST00000368838 BAHCC1Q9P281 2608 aa8.78□□□□□ -1
SNX27-201ENST00000368838 APC2O95996 2303 aa8.78□□□□□ -1
SNX27-201ENST00000368838 CCDC189A1A4V9 331 aa8.78□□□□□ -1
SNX27-201ENST00000368838 TSPAN11A1L157 253 aa8.78□□□□□ -1
SNX27-201ENST00000368838 ANKRD66B4E2M5 251 aa8.78□□□□□ -1
SNX27-201ENST00000368838 LDB2O43679 373 aa8.78□□□□□ -1
SNX27-201ENST00000368838 PMPCBO75439 489 aa8.78□□□□□ -1
SNX27-201ENST00000368838 BANF1O75531 89 aa8.78□□□□□ -1
SNX27-201ENST00000368838 CRTAMO95727 393 aa8.78□□□□□ -1
SNX27-201ENST00000368838 IGSF6O95976 241 aa8.78□□□□□ -1
SNX27-201ENST00000368838 ADH1BP00325 375 aa8.78□□□□□ -1
SNX27-201ENST00000368838 ACADMP11310 421 aa8.78□□□□□ -1
SNX27-201ENST00000368838 SRCP12931 536 aa8.78□□□□□ -1
SNX27-201ENST00000368838 GNSP15586 552 aa8.78□□□□□ -1
SNX27-201ENST00000368838 CD70P32970 193 aa8.78□□□□□ -1
SNX27-201ENST00000368838 ACSL1P33121 698 aa8.78□□□□□ -1
SNX27-201ENST00000368838 HMGCLP35914 325 aa8.78□□□□□ -1
SNX27-201ENST00000368838 SLC26A3P40879 764 aa8.78□□□□□ -1
SNX27-201ENST00000368838 SUOXP51687 545 aa8.78□□□□□ -1
SNX27-201ENST00000368838 LIMK2P53671 638 aa8.78□□□□□ -1
SNX27-201ENST00000368838 SESN2P58004 480 aaPredicted RBP8.78□□□□□ -1
SNX27-201ENST00000368838 SNRPD1P62314 119 aaKnown RBP8.78□□□□□ -1
SNX27-201ENST00000368838 BNC1Q01954 994 aa8.78□□□□□ -1
SNX27-201ENST00000368838 TERF2Q15554 542 aa8.78□□□□□ -1
SNX27-201ENST00000368838 TAF1AQ15573 450 aaPredicted RBP8.78□□□□□ -1
SNX27-201ENST00000368838 TRIP6Q15654 476 aaKnown RBP8.78□□□□□ -1
SNX27-201ENST00000368838 KCTD19Q17RG1 926 aaPredicted RBP8.78□□□□□ -1
SNX27-201ENST00000368838 SKIDA1Q1XH10 827 aa8.78□□□□□ -1
SNX27-201ENST00000368838 CCDC157Q569K6 752 aa8.78□□□□□ -1
SNX27-201ENST00000368838 SIRPB2Q5JXA9 342 aa8.78□□□□□ -1
SNX27-201ENST00000368838 CERCAMQ5T4B2 595 aa8.78□□□□□ -1
SNX27-201ENST00000368838 TSTD2Q5T7W7 516 aa8.78□□□□□ -1
SNX27-201ENST00000368838 TRMT10BQ6PF06 316 aaKnown RBP8.78□□□□□ -1
SNX27-201ENST00000368838 NAXDQ8IW45 347 aa8.78□□□□□ -1
SNX27-201ENST00000368838 APCDD1Q8J025 514 aa8.78□□□□□ -1
SNX27-201ENST00000368838 CBARPQ8N350 705 aaPredicted RBP8.78□□□□□ -1
SNX27-201ENST00000368838 KDF1Q8NAX2 398 aaPredicted RBP8.78□□□□□ -1
SNX27-201ENST00000368838 OR2AP1Q8NGE2 309 aa8.78□□□□□ -1
SNX27-201ENST00000368838 DENND1AQ8TEH3 1009 aa8.78□□□□□ -1
SNX27-201ENST00000368838 SETD7Q8WTS6 366 aaKnown RBP8.78□□□□□ -1
SNX27-201ENST00000368838 IFT43Q96FT9 208 aa8.78□□□□□ -1
SNX27-201ENST00000368838 FCRL3Q96P31 734 aaPredicted RBP8.78□□□□□ -1
SNX27-201ENST00000368838 MCCC1Q96RQ3 725 aaPredicted RBP8.78□□□□□ -1
SNX27-201ENST00000368838 FAM167BQ9BTA0 163 aa8.78□□□□□ -1
SNX27-201ENST00000368838 FICDQ9BVA6 458 aa8.78□□□□□ -1
SNX27-201ENST00000368838 GAREM1Q9H706 876 aa8.78□□□□□ -1
SNX27-201ENST00000368838 SMYD2Q9NRG4 433 aa8.78□□□□□ -1
SNX27-201ENST00000368838 ZFATQ9P243 1243 aa8.78□□□□□ -1
SNX27-201ENST00000368838 USP36Q9P275 1121 aaKnown RBP8.78□□□□□ -1
SNX27-201ENST00000368838 NFKBIL1Q9UBC1 381 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms