RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 DNAJC6O75061 913 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 RPL22P35268 128 aaKnown RBP22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 GNPDA1P46926 289 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 TAF1AQ15573 450 aaPredicted RBP22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 CCDC157Q569K6 752 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 PDPK2PQ6A1A2 396 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 GKN2Q86XP6 184 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 SLC35F3Q8IY50 421 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 BRSK1Q8TDC3 778 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 GPBAR1Q8TDU6 330 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 SCNM1Q9BWG6 230 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 SUDS3Q9H7L9 328 aaPredicted RBP22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 TRNAU1APQ9NX07 287 aaKnown RBP22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 SMARCAL1Q9NZC9 954 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 KCTD3Q9Y597 815 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 PSMD3O43242 534 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 RFPL3O75679 317 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 CA5AP35218 305 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 FDFT1P37268 417 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 DAB2P98082 770 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 KCTD19Q17RG1 926 aaPredicted RBP22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 PYCR3Q53H96 274 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 ZNF648Q5T619 568 aaPredicted RBP22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 DHRS13Q6UX07 377 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 DTX3LQ8TDB6 740 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 GLYATL1Q969I3 302 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 ARFGAP3Q9NP61 516 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 VPS18Q9P253 973 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 SNX12Q9UMY4 172 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 PLEKHM1Q9Y4G2 1056 aa22.25■■□□□ 1.15
ECHDC1-203ENST00000368291 KNTC1P50748 2209 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 ASMTLO95671 621 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 LPOP22079 712 aaPredicted RBP22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 MSNP26038 577 aaKnown RBP22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 SPAM1P38567 509 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 ADCY8P40145 1251 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 SEMA5AQ13591 1074 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 ATP13A5Q4VNC0 1218 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 MARK2Q7KZI7 788 aaKnown RBP22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 TAF8Q7Z7C8 310 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 SFTPA2Q8IWL1 248 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 CCDC89Q8N998 374 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 HOMER3Q9NSC5 361 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 PAK5Q9P286 719 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 ATXN10Q9UBB4 475 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 FEZ2Q9UHY8 353 aaPredicted RBP22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 KLK13Q9UKR3 277 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 ANGPTL2Q9UKU9 493 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 DOLKQ9UPQ8 538 aa22.24■■□□□ 1.15
ECHDC1-203ENST00000368291 ZNF185O15231 689 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 STX7O15400 261 aaKnown RBP22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 GPR39O43194 453 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 LDB2O43679 373 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 PPFIA2O75334 1257 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 SLC25A14O95258 325 aaPredicted RBP22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 TPH1P17752 444 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 AK4P27144 223 aaPredicted RBP22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 ILKQ13418 452 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 KHDC1Q4VXA5 237 aaKnown RBP22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 TTC27Q6P3X3 843 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 GUSBP11Q6P575 273 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 OR4K2Q8NGD2 314 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 VPS35Q96QK1 796 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 AP1M1Q9BXS5 423 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 RAB6BQ9NRW1 208 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 PIH1D1Q9NWS0 290 aaKnown RBP22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.23■■□□□ 1.153e-6■■■■□ 21.3
ECHDC1-203ENST00000368291 GPR34Q9UPC5 381 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 PKP3Q9Y446 797 aa22.23■■□□□ 1.15
ECHDC1-203ENST00000368291 EME2A4GXA9 379 aaPredicted RBP22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 FAM221BA6H8Z2 402 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 C2orf81A6NN90 581 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 ERI2A8K979 691 aaKnown RBP22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 CES2O00748 559 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 SUN1O94901 812 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 ACTN2P35609 894 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 GRIA1P42261 906 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 ZNF140P52738 457 aaPredicted RBP22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 CLDN6P56747 220 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 CTBSQ01459 385 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 SMAD1Q15797 465 aaKnown RBP22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 CHRNA6Q15825 494 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 CYP1B1Q16678 543 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 ZDHHC20Q5W0Z9 365 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 OGFOD3Q6PK18 319 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 FAM151BQ6UXP7 276 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 ADGRG6Q86SQ4 1221 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 KYQ8NBH2 561 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 GPR156Q8NFN8 814 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 OR13C4Q8NGS5 318 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 ACTRT1Q8TDG2 376 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 LRRC45Q96CN5 670 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 OR2M4Q96R27 311 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 TRIM39Q9HCM9 518 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 SPATS2LQ9NUQ6 558 aaKnown RBP22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 SIRPGQ9P1W8 387 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 PRKAB1Q9Y478 270 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 GPSM3Q9Y4H4 160 aa22.22■■□□□ 1.15
ECHDC1-203ENST00000368291 GLYATL1P3A0A0U1RQE8 302 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms