RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 NSUN3Q9H649 340 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 EFCAB1Q9HAE3 211 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 CSNK1G1Q9HCP0 422 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 VPS45Q9NRW7 570 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 DONSONQ9NYP3 566 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ARID1BQ8NFD5 2236 aaPredicted RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 MAP1BP46821 2468 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 NCAM2O15394 837 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 NUDT7P0C024 238 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ATXN1LP0C7T5 689 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 C7P10643 843 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 MYL4P12829 197 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ACADSP16219 412 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 PRKACGP22612 351 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 NFKBIAP25963 317 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 RPL9P32969 192 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 RAP1GDS1P52306 607 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 RHOAP61586 193 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 CDC42EP1Q00587 391 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 GNA12Q03113 381 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 TRAF2Q12933 501 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 CDH18Q13634 790 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ARHGEF7Q14155 803 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 CYP27C1Q4G0S4 372 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 OR52E8Q6IFG1 317 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 IL27RAQ6UWB1 636 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 FRA10AC1Q70Z53 315 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 LRRC8DQ7L1W4 858 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 GPSM1Q86YR5 675 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 PHACTR4Q8IZ21 702 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 DCP1BQ8IZD4 617 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 TTC30BQ8N4P2 665 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ATP6V0D2Q8N8Y2 350 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 C2CD4AQ8NCU7 369 aaPredicted RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 FBXO30Q8TB52 745 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ACMSDQ8TDX5 336 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ACTRT2Q8TDY3 377 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 SOCS4Q8WXH5 440 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 IMP4Q96G21 291 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 TMEM79Q9BSE2 394 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 HGH1Q9BTY7 390 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 RNF208Q9H0X6 261 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ATG10Q9H0Y0 220 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 SLC25A51Q9H1U9 297 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ZBTB26Q9HCK0 441 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 EIF2B3Q9NR50 452 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 DNAJC28Q9NX36 388 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 RCOR3Q9P2K3 495 aaPredicted RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ZNF212Q9UDV6 495 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 AGO1Q9UL18 857 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 PNMA8BQ9ULN7 279 aaPredicted RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 BRWD1Q9NSI6 2320 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 COL6A3P12111 3177 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 C1orf232A0A0U1RR37 186 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 A0A1W2PRU2 124 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 C7orf72A4D263 438 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 SLC38A8A6NNN8 435 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 H3BSA7 217 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ARVCFO00192 962 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ANGPT2O15123 496 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 NRP2O60462 931 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 SNX2O60749 519 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 TSHRP16473 764 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ITPKAP23677 461 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 AQP1P29972 269 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ADSLP30566 484 aaPredicted RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ADRA1AP35348 466 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ATP5C1P36542 298 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 MTTPP55157 894 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 NTHL1P78549 312 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 SCAPQ12770 1279 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ZNF177Q13360 481 aaPredicted RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 NFYCQ13952 458 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 NR6A1Q15406 480 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 DBN1Q16643 649 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ZNF423Q2M1K9 1284 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 PAGE3Q5JUK9 113 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 PTRHD1Q6GMV3 140 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 KRT80Q6KB66 452 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 ANKS3Q6ZW76 656 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 TRIM74Q86UV6 250 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 FUNDC1Q8IVP5 155 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 CMTM8Q8IZV2 173 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 RNF217Q8TC41 542 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 MAGEE2Q8TD90 523 aaPredicted RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 SLC9A7Q96T83 725 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 MRPL57Q9BQC6 102 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 TUBB6Q9BUF5 446 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 UBE2OQ9C0C9 1292 aaKnown RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 GSTO2Q9H4Y5 243 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 TREX1Q9NSU2 369 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 MARCH5Q9NX47 278 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 CACNA2D2Q9NY47 1150 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 UBA2Q9UBT2 640 aaPredicted RBP5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 LZTS1Q9Y250 596 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 PRKAB1Q9Y478 270 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 PRSS21Q9Y6M0 314 aa5.6□□□□□ -1.51
TNFSF4-202ENST00000367718 SBF1O95248 1867 aa5.59□□□□□ -1.51
TNFSF4-202ENST00000367718 MUC3AQ02505 3323 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms