RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 COMTD1Q86VU5 262 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 RPL3LQ92901 407 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 NLE1Q9NVX2 485 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 GSRP00390 522 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 UCHL1P09936 223 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 OSTNP61366 133 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CD163Q86VB7 1156 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 NETO2Q8NC67 525 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 EMID1Q96A84 441 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF419Q96HQ0 510 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 VTA1Q9NP79 307 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CEP170BQ9Y4F5 1589 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 C5orf58C9J3I9 102 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 S100PP25815 95 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PTGDRQ13258 359 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 SAMD12Q8N8I0 201 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ASCC1Q8N9N2 400 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 POP1Q99575 1024 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CHID1Q9BWS9 393 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 USP29Q9HBJ7 922 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 BHLHE40O14503 412 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 UBCP0CG48 685 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ACO1P21399 889 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 IDI1Q13907 227 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PAGE2Q7Z2X7 111 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF598Q86UK7 904 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 MAP6Q96JE9 813 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 KAT8Q9H7Z6 458 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TMCC3Q9ULS5 477 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 RAP2CQ9Y3L5 183 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 LCHNA4D1U4 455 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 STK16O75716 305 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GYG1P46976 350 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 FMO5P49326 533 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PDXPQ96GD0 296 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF496Q96IT1 587 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PANX3Q96QZ0 392 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 LRRC3Q9BY71 257 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 UBE2TQ9NPD8 197 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 LYRM2Q9NU23 88 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TRPV2Q9Y5S1 764 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 MYL12BO14950 172 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 KCNH1O95259 989 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TPSB2P20231 275 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 SKIV2LQ15477 1246 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TPSAB1Q15661 275 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CASP12Q6UXS9 341 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 IZUMO1Q8IYV9 350 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ADAM2Q99965 735 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 SALL3Q9BXA9 1300 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 A0A0A6YYH2 397 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 A6NJ64 397 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 USP17L12C9JPN9 530 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 USP17L21D6R901 530 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 KMOO15229 486 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PSMD8P48556 350 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GDI2P50395 445 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CRYZQ08257 329 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CDH17Q12864 832 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GRIK4Q16099 956 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TAF12Q16514 161 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 EPHA10Q5JZY3 1008 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CASC4Q6P4E1 433 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TERB2Q8NHR7 220 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 LIN7BQ9HAP6 207 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 UBFD1O14562 309 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PBX1P40424 430 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 FLI1Q01543 452 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF746Q6NUN9 644 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ABI1Q8IZP0 508 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM260Q9NX78 707 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 SOBPA7XYQ1 873 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PPEF2O14830 753 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 IFNGP01579 166 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ALDH4A1P30038 563 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 OR1G1P47890 313 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ALDH3A2P51648 485 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 C3orf38Q5JPI3 329 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF367Q7RTV3 350 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 FAM216AQ8WUB2 273 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 INPP4AQ96PE3 977 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 NKRFO15226 690 aaKnown RBP eCLIP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GATCO43716 136 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 SCGB2A1O75556 95 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 S100A2P29034 98 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PI4K2BQ8TCG2 481 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 LENG9Q96B70 501 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZDHHC15Q96MV8 337 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PRDM11Q9NQV5 511 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ACAD8Q9UKU7 415 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PHF8Q9UPP1 1060 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 H0Y8G0 127 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 NUDT14O95848 222 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GP2P55259 537 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 KLHL35Q6PF15 583 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ASB15Q8WXK1 588 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GGHQ92820 318 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 UQCC2Q9BRT2 126 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 AURKCQ9UQB9 309 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms