RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CXCL17Q6UXB2 119 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC35B2Q8TB61 432 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC22A17Q8WUG5 538 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 PIK3R5Q8WYR1 880 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 DNAJC11Q9NVH1 559 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 TIAM2Q8IVF5 1701 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 FOXM1Q08050 763 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 LPIN1Q14693 890 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 MINDY2Q8NBR6 621 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 RFKQ969G6 155 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 SIX2Q9NPC8 291 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 TMEM39AQ9NV64 488 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC45A1Q9Y2W3 748 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 TDRKHQ9Y2W6 561 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 PCDHB9Q9Y5E1 797 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 SNPHO15079 494 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 TSPAN1O60635 241 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ELFN1P0C7U0 828 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 PSMA1P25786 263 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 SPAM1P38567 509 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 BPIFB6Q8NFQ5 453 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 RERGQ96A58 199 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ARL8BQ9NVJ2 186 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZSCAN32Q9NX65 697 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 CCDC162PA2VCL2 907 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 H3BNH8 94 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ATXN8OSP0DMR3 200 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ACTR3P61158 418 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 PTSQ03393 145 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 GBE1Q04446 702 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 GSTCDQ8NEC7 633 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 NDNQ99608 321 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZFP14Q9HCL3 533 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 PHF11Q9UIL8 331 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 MRTO4Q9UKD2 239 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC35G4P0C7Q5 338 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC1A5Q15758 541 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 AP5B1Q2VPB7 878 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ARMC8Q8IUR7 673 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 MECRQ9BV79 373 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ADM5C9JUS6 153 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF57Q68EA5 555 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 SAMD14Q8IZD0 417 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 FAM47BQ8NA70 645 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 C11orf65Q8NCR3 313 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF514Q96K75 400 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 SHROOM3Q8TF72 1996 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 PAPSS1O43252 624 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 SMAD3P84022 425 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 DGCR6Q14129 220 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ARL13AQ5H913 290 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 SULT1C3Q6IMI6 304 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 FNDC11Q9BVV2 318 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ELOVL7A1L3X0 281 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 C17orf64Q86WR6 236 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF671Q8TAW3 534 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 UGT2B17O75795 530 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 DDNO94850 711 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 NR2F1P10589 423 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 PIK3CBP42338 1070 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 PPCDCQ96CD2 204 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 UNKQ9C0B0 810 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 UBE2QL1A1L167 161 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 RGS10O43665 173 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 TRMUO75648 421 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 ITGADQ13349 1161 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 AIF1LQ9BQI0 150 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 FZD8Q9H461 694 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 USP20Q9Y2K6 914 aa11.98□□□□□ -0.49
CDC42BPA-203ENST00000366766 A0A1W2PPM1 405 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 AQP12BA6NM10 295 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 TBL1XO60907 577 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 OR6B1O95007 311 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 FGBP02675 491 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 GPR1P46091 355 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 LIN54Q6MZP7 749 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 CMC1Q7Z7K0 106 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 AQP12AQ8IXF9 295 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 JOSD2Q8TAC2 188 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 OR8D1Q8WZ84 308 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZDHHC4Q9NPG8 344 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 A0A1B0GUL6 1792 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 TRIM43BA6NCK2 446 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 NPPAP01160 153 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 TRBC1P01850 177 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 CXCR3P49682 368 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 ABRQ12979 859 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 QPCTQ16769 361 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 ATP13A5Q4VNC0 1218 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 C3orf14Q9HBI5 128 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 TWIST2Q8WVJ9 160 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 PEX13Q92968 403 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 MYL9P24844 172 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 FNBP1LQ5T0N5 605 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 FBXW11Q9UKB1 542 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 BCKDKO14874 412 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 TSPAN3O60637 253 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 CDH5P33151 784 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 TAF5Q15542 800 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 TAF1AQ15573 450 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms