RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 EPB41L1Q9H4G0 881 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 EIF2B5Q13144 721 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 ANGPT1Q15389 498 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 BICRALQ6AI39 1079 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 P2RY8Q86VZ1 359 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 PANX1Q96RD7 426 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 EBF4Q9BQW3 602 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 HDHD2Q9H0R4 259 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 ADAM7Q9H2U9 754 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 GRIN3BO60391 1043 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 CNPP09543 421 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 CREMQ03060 361 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 GALNT18Q6P9A2 607 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 EFCAB3Q8N7B9 438 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 POC5Q8NA72 575 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 CLP1Q92989 425 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 FCRL5Q96RD9 977 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 MTIF3Q9H2K0 278 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 VRTNQ9H8Y1 702 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 POMCP01189 267 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 EPHX2P34913 555 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 DNAJB13P59910 316 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 TYW3Q6IPR3 259 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 KLHDC10Q6PID8 442 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZFP28Q8NHY6 868 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 TIFAQ96CG3 184 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 EHD1Q9H4M9 534 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 TLE6Q9H808 572 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 CCDC162PA2VCL2 907 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 ADCYAP1R1P41586 468 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 COX10Q12887 443 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 REXO5Q96IC2 774 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 SNX8Q9Y5X2 465 aa11.75□□□□□ -0.53
CDC42BPA-202ENST00000366764 STK16O75716 305 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 LILRA4P59901 499 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 SKP1P63208 163 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 RHDQ02161 417 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 MVKQ03426 396 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 TUSC3Q13454 348 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 GLYATQ6IB77 296 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 OLFML1Q6UWY5 402 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PRR23CQ6ZRP0 262 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZNF607Q96SK3 696 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ASB8Q9H765 288 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 F5P12259 2224 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 CNTNAP1P78357 1384 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 KLRG2A4D1S0 409 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 GSTM5P46439 218 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ERVK-8P63133 956 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 FGD3Q5JSP0 725 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PPM1MQ96MI6 270 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 LRTM1Q9HBL6 345 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 WRAP73Q9P2S5 460 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 FAM186AA6NE01 2351 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ESR1P03372 595 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 CLDN10P78369 228 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 TRIM71Q2Q1W2 868 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 DNAJB7Q7Z6W7 309 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 DPP7Q9UHL4 492 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PRDM8Q9NQV8 689 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PACSIN3Q9UKS6 424 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 COL18A1P39060 1754 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ITGA7Q13683 1181 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZC3HC1Q86WB0 502 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 CHID1Q9BWS9 393 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 SPRTNQ9H040 489 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 OSBPL2Q9H1P3 480 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 TFB2MQ9H5Q4 396 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ACTR3BQ9P1U1 418 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PNMA8BQ9ULN7 279 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZNF510Q9Y2H8 683 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 KCNE2Q9Y6J6 123 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PTPRJQ12913 1337 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ANGPTL1O95841 491 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PRPS2P11908 318 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 VPS26BQ4G0F5 336 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 CPTPQ5TA50 214 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 IPCEF1Q8WWN9 437 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 KCTD13Q8WZ19 329 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 KLRG1Q96E93 195 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ACBD6Q9BR61 282 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 NLNQ9BYT8 704 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 TRPC4Q9UBN4 977 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PRKAR1AP10644 381 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 IMPDH1P20839 514 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZNF157P51786 506 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 WDR36Q8NI36 951 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 BRSK1Q8TDC3 778 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PEX13Q92968 403 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZFP14Q9HCL3 533 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 CNOT11Q9UKZ1 510 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 TTC3P53804 2025 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PIPSLA2A3N6 862 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 LGR5O75473 907 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PKMP14618 531 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 TYSND1Q2T9J0 566 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 FBXO43Q4G163 708 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 TSTD2Q5T7W7 516 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC39A4Q6P5W5 647 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms