RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 USP8P40818 1118 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 UBA7P41226 1012 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 CLDN20P56880 219 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 GOLGA8DPQ0D2H9 430 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 NIPAL4Q0D2K0 466 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 CDC16Q13042 620 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 KRT32Q14532 448 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 SYT16Q17RD7 645 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 KRTAP24-1Q3LI83 254 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 LRIF1Q5T3J3 769 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 HAUS3Q68CZ6 603 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 C18orf63Q68DL7 685 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 TRNP1Q6NT89 227 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 SEPT14Q6ZU15 432 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 ZNF329Q86UD4 541 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 TMPRSS12Q86WS5 348 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 ARHGAP12Q8IWW6 846 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 SLC38A5Q8WUX1 472 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 ZKSCAN4Q969J2 545 aaPredicted RBP3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 PIGTQ969N2 578 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 FEM1CQ96JP0 617 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 QRFPRQ96P65 431 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 SYT17Q9BSW7 474 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 POLR3GLQ9BT43 218 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 PIGMQ9H3S5 423 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 SMC4Q9NTJ3 1288 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 OLA1Q9NTK5 396 aaKnown RBP3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 COPG2Q9UBF2 871 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 OR14J1Q9UGF5 321 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 POU2F3Q9UKI9 436 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 KLHL20Q9Y2M5 609 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 PTPRCP08575 1304 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 TDRD9Q8NDG6 1382 aaKnown RBP3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 FAM90A26D6RGX4 464 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 C16orf97H3BN30 126 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 H3BQ06 376 aaPredicted RBP3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 HCRTR2O43614 444 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 RNASEH2AO75792 299 aaKnown RBP3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 IGKV3-20P01619 116 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 ICAM1P05362 532 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 UGT1A1P22309 533 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 PSMA4P25789 261 aaKnown RBP3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 MARK3P27448 753 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 MAPK4P31152 587 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 IL15P40933 162 aaPredicted RBP3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 COG7P83436 770 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 RUNX1T1Q06455 604 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 HYAL1Q12794 435 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 MAD2L1Q13257 205 aaPredicted RBP3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 GTF2H2Q13888 395 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 ZNF234Q14588 700 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 RBBP5Q15291 538 aaKnown RBP3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 PNLIPRP3Q17RR3 467 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 SOWAHCQ53LP3 525 aaPredicted RBP3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 ZNF805Q5CZA5 627 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 STPG1Q5TH74 334 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 SNX30Q5VWJ9 437 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 GTF2H2CQ6P1K8 395 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 NCEH1Q6PIU2 408 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 DSTYKQ6XUX3 929 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 ATG9AQ7Z3C6 839 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 SDCCAG8Q86SQ7 713 aaPredicted RBP3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 GPR180Q86V85 440 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 ADSSL1Q8N142 457 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 IL17RCQ8NAC3 791 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 OR13A1Q8NGR1 328 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 SLC44A1Q8WWI5 657 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 ARHGEF2Q92974 986 aaKnown RBP3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 EGLN2Q96KS0 407 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 C1orf74Q96LT6 269 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 ITPAQ9BY32 194 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 MUC13Q9H3R2 512 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 RRP7BPQ9NSQ0 103 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 DIAPH3Q9NSV4 1193 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 ZFP57Q9NU63 452 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 ABCF3Q9NUQ8 709 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 EHD2Q9NZN4 543 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 ZNF69Q9UC07 566 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 FBXL2Q9UKC9 423 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 DLGAP4Q9Y2H0 992 aa3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 R3HDM2Q9Y2K5 976 aaKnown RBP3.11□□□□□ -1.91
RNU4-48P-201ENST00000365559 RUSC2Q8N2Y8 1516 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 A0A087X0M5 115 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 A0A0B4J293 547 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 A0A1B0GX30 115 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 A0A1W2PS18 150 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 HS3ST1O14792 307 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 ANKRD28O15084 1053 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 KCNN4O15554 427 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 GRID2O43424 1007 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 USO1O60763 962 aaKnown RBP3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 NDUFS3O75489 264 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 CRYAAP02489 173 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 CETPP11597 493 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 LAMP2P13473 410 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 RARGP13631 454 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 CHMP24386 653 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 GALCP54803 685 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 TAS2R40P59535 323 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 MRPS34P82930 218 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms