RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 POLR3CQ9BUI4 534 aaPredicted RBP3.93□□□□□ -1.78
RNU6-553P-201ENST00000364047 STRA6Q9BX79 667 aa3.93□□□□□ -1.78
RNU6-553P-201ENST00000364047 PREBQ9HCU5 417 aa3.93□□□□□ -1.78
RNU6-553P-201ENST00000364047 LTB4R2Q9NPC1 389 aa3.93□□□□□ -1.78
RNU6-553P-201ENST00000364047 ACSL5Q9ULC5 683 aa3.93□□□□□ -1.78
RNU6-553P-201ENST00000364047 GTF2A1LQ9UNN4 478 aa3.93□□□□□ -1.78
RNU6-553P-201ENST00000364047 TCF19Q9Y242 345 aa3.93□□□□□ -1.78
RNU6-553P-201ENST00000364047 A0A1W2PPH5 198 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 A0A1W2PRG0 241 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 NPIPB15A6NHN6 443 aaPredicted RBP3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 CYSRT1A8MQ03 144 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 M0QZ24 198 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 NPHP1O15259 732 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 TGFB1I1O43294 461 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 PRSS1P07477 247 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 CFC1BP0CG36 223 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 CFC1P0CG37 223 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 FAM106CPP0CH98 169 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 UBA1P22314 1058 aaKnown RBP3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 UBA7P41226 1012 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 HOXA1P49639 335 aaPredicted RBP3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 LINC01547P58512 204 aaPredicted RBP3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 RPL7AP62424 266 aaKnown RBP3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 TMEM115Q12893 351 aaPredicted RBP3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 MAD2L1Q13257 205 aaPredicted RBP3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 CCNG2Q16589 344 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 MYLK3Q32MK0 819 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 CDONQ4KMG0 1287 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 C18orf63Q68DL7 685 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 FAM171BQ6P995 826 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 RAD9BQ6WBX8 426 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 R3HCC1LQ7Z5L2 792 aaKnown RBP3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 NRROSQ86YC3 692 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 EPHX4Q8IUS5 362 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 MAP7D3Q8IWC1 876 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 KLHDC8BQ8IXV7 354 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 FAM149B1Q96BN6 582 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 INTS12Q96CB8 462 aaKnown RBP3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 MMABQ96EY8 250 aaPredicted RBP3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 JMJD4Q9H9V9 463 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 SCPEP1Q9HB40 452 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 DLGAP2Q9P1A6 1054 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 GAB2Q9UQC2 676 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 MAU2Q9Y6X3 613 aa3.92□□□□□ -1.78
RNU6-553P-201ENST00000364047 A0A1B0GVC2 190 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 C1orf226A1L170 272 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 PAGE4O60829 102 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 SPARCP09486 303 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 ATP1A3P13637 1013 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 TIMP3P35625 211 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 CDKN1AP38936 164 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 APOBEC1P41238 236 aaKnown RBP3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 CRIP2P52943 208 aaPredicted RBP3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 CASP6P55212 293 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 CLDN20P56880 219 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 COG7P83436 770 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 PLIN5Q00G26 463 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 CEP85LQ5SZL2 805 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 ADAM5Q6NVV9 412 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 ZNF704Q6ZNC4 412 aaPredicted RBP3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 EXOC8Q8IYI6 725 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 OR52I2Q8NH67 350 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 THAP6Q8TBB0 222 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 LINGO1Q96FE5 620 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 PDCL3Q9H2J4 239 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 FAM118AQ9NWS6 357 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 HCFC1R1Q9NWW0 138 aa3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 C9orf78Q9NZ63 289 aaPredicted RBP3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 CNOT8Q9UFF9 292 aaKnown RBP3.91□□□□□ -1.78
RNU6-553P-201ENST00000364047 ZCWPW2A0A1B0GU75 182 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 ANKRD28O15084 1053 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 KCNN4O15554 427 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 IPO7O95373 1038 aaKnown RBP3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 PAK4O96013 591 aaPredicted RBP3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 PBX3P40426 434 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 MMP14P50281 582 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 CEBPZQ03701 1054 aaKnown RBP3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 GORABQ5T7V8 394 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 TMEM116Q8NCL8 245 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 GRAPLQ8TC17 118 aaPredicted RBP3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 TMEM255BQ8WV15 326 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 SLC44A1Q8WWI5 657 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 DNAAF4Q8WXU2 420 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 DUX3Q96PT4 197 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 MAP7D2Q96T17 732 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 SEC62Q99442 399 aaKnown RBP3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 RANGRFQ9HD47 186 aaPredicted RBP3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 SCRT2Q9NQ03 307 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 MAP3K20Q9NYL2 800 aaKnown RBP3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 STK39Q9UEW8 545 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 OR14J1Q9UGF5 321 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 POLG2Q9UHN1 485 aa3.9□□□□□ -1.79
RNU6-553P-201ENST00000364047 FAM90A26D6RGX4 464 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 EIF3DO15371 548 aaKnown RBP eCLIP3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 JRKO75564 520 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 SLC25A12O75746 678 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 CGAP01215 116 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 IGHV4-39P01824 125 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 AMBPP02760 352 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms