RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 PRSS57Q6UWY2 283 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 CREB3L2Q70SY1 520 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 PCGF5Q86SE9 256 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 RBM23Q86U06 439 aaKnown RBP4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 TSPAN33Q86UF1 283 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 SATL1Q86VE3 508 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 TEX11Q8IYF3 940 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 C17orf53Q8N3J3 647 aaPredicted RBP4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 ACVR1CQ8NER5 493 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 LILRB1Q8NHL6 650 aaPredicted RBP4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 HM13Q8TCT9 377 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 RTP4Q96DX8 246 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 PGAM5Q96HS1 289 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 SMC6Q96SB8 1091 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 TM6SF1Q9BZW5 370 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 PAG1Q9NWQ8 432 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 SMARCAL1Q9NZC9 954 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 OGFRQ9NZT2 677 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 MALT1Q9UDY8 824 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 FBXO2Q9UK22 296 aaPredicted RBP4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 LOXL2Q9Y4K0 774 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 SCN5AQ14524 2016 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 PLPP2O43688 288 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 AHCYL1O43865 530 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 TUBBP07437 444 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 LDHCP07864 332 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 CSH1P0DML2 217 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 CSH2P0DML3 217 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 RRM1P23921 792 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 GCH1P30793 250 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 CORO1AP31146 461 aaKnown RBP4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 CCKARP32238 428 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 CLCNKAP51800 687 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 PSMC6P62333 389 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 MRPS34P82930 218 aaKnown RBP4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 TFAP4Q01664 338 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 SLC20A2Q08357 652 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 HNRNPA0Q13151 305 aaKnown RBP4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 WTAPQ15007 396 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 DECR1Q16698 335 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 FRG2Q64ET8 278 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 KRBA2Q6ZNG9 492 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 C16orf82Q7Z2V1 217 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 ODF3L1Q8IXM7 274 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 OR5R1Q8NH85 324 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 LMO3Q8TAP4 145 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 SLC20A1Q8WUM9 679 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 RSRC1Q96IZ7 334 aaKnown RBP4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 ADGRG7Q96K78 797 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 PCDH9Q9HC56 1237 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 EPB41L5Q9HCM4 733 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 SUCLA2Q9P2R7 463 aaPredicted RBP4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 KLHL20Q9Y2M5 609 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 CMAHPQ9Y471 501 aa4.23□□□□□ -1.73
RNU6-560P-201ENST00000364007 A0A0G2JPF8 293 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 HNRNPCL3B7ZW38 293 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 ZNF587BE7ETH6 402 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 OGG1O15527 345 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 KCNAB3O43448 404 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 GPC4O75487 556 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 RFPL2O75678 378 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 HIST1H2ABP04908 130 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 SRPRAP08240 638 aaKnown RBP4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 HNRNPCL4P0DMR1 293 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 HIST1H2ADP20671 130 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 S1PR1P21453 382 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 PON1P27169 355 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 CLDN20P56880 219 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 TAS2R38P59533 333 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 PDE1BQ01064 536 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 SREBF2Q12772 1141 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 AIMP2Q13155 320 aaKnown RBP4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 MAD2L1Q13257 205 aaPredicted RBP4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 ACVR2BQ13705 512 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 SLC39A14Q15043 492 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 PCGF3Q3KNV8 242 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 C18orf63Q68DL7 685 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 ZNF324BQ6AW86 544 aaPredicted RBP4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 NADSYN1Q6IA69 706 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 LCN10Q6JVE6 187 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 BRAT1Q6PJG6 821 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 CCNI2Q6ZMN8 369 aaPredicted RBP4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 MEPCEQ7L2J0 689 aaKnown RBP4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 HIST3H2AQ7L7L0 130 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 RPAP2Q8IXW5 612 aaPredicted RBP4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 RASGEF1CQ8N431 466 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 OR1J2Q8NGS2 313 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 ABTB1Q969K4 478 aaPredicted RBP4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 TAAR8Q969N4 342 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 CALML4Q96GE6 196 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 TMX4Q9H1E5 349 aaPredicted RBP4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 LRRC4Q9HBW1 653 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 MCM9Q9NXL9 1143 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 ZNF224Q9NZL3 707 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 STK39Q9UEW8 545 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 SIX4Q9UIU6 781 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 FBXW11Q9UKB1 542 aa4.22□□□□□ -1.73
RNU6-560P-201ENST00000364007 GOLGA6L9A6NEM1 432 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 C4orf47A7E2U8 309 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms