RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 EBNA1BP2Q99848 306 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 RMI1Q9H9A7 625 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 EPB41L5Q9HCM4 733 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 VPS18Q9P253 973 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 DMGDHQ9UI17 866 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 FKBPLQ9UIM3 349 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 CNOT6Q9ULM6 557 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 CA5BQ9Y2D0 317 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 OR1A2Q9Y585 309 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 SLC30A1Q9Y6M5 507 aa13.73□□□□□ -0.21
NSMCE1-201ENST00000361439 RIF1Q5UIP0 2472 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 EP300Q09472 2414 aaPredicted RBP13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 PLXNA2O75051 1894 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 TRBV5-4A0A0C4DH59 114 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 GOLGA8CPA6NN73 597 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 FADS2P1A8MWK0 482 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 SLC25A14O95258 325 aaPredicted RBP13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 ZNF883P0CG24 379 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 PGAM1P18669 254 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 MC4RP32245 332 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 RXRGP48443 463 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 ARRB1P49407 418 aaPredicted RBP13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 PRAMEP78395 509 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 IRX4P78413 519 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 CRADDP78560 199 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 DHX9Q08211 1270 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 GRIK2Q13002 908 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 FRG1Q14331 258 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 FZD2Q14332 565 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 CHRNA6Q15825 494 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 ZNF423Q2M1K9 1284 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 ATP13A5Q4VNC0 1218 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 AARS2Q5JTZ9 985 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 FNBP1LQ5T0N5 605 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 LYPLAL1Q5VWZ2 237 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 ALS2CLQ60I27 953 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 KIAA0930Q6ICG6 404 aaPredicted RBP13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 CERS6Q6ZMG9 384 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 LMNTD2Q8IXW0 634 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 PELI3Q8N2H9 469 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 MPP5Q8N3R9 675 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 DDHD1Q8NEL9 900 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 OR56A4Q8NGH8 313 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 OR4L1Q8NH43 312 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 FBXO25Q8TCJ0 367 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 SCARF2Q96GP6 870 aaPredicted RBP13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 TTC1Q99614 292 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 ZCCHC2Q9C0B9 1178 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 ASB8Q9H765 288 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 TRIM39Q9HCM9 518 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 MTRF1LQ9UGC7 380 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 SLC17A4Q9Y2C5 497 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 TEX264Q9Y6I9 313 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 DGKBQ9Y6T7 804 aa13.72□□□□□ -0.21
NSMCE1-201ENST00000361439 DOCK9Q9BZ29 2069 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 PATE3B3GLJ2 98 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 VEGFDO43915 354 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 CSF2P04141 144 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 ENGP17813 658 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 TGM1P22735 817 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 PI4KAP42356 2102 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 ATXN3P54252 364 aaPredicted RBP13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 HNRNPKP61978 463 aaKnown RBP eCLIP13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 BNC1Q01954 994 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 SPEM2Q0P670 501 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 PTPRCAPQ14761 206 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 BBS9Q3SYG4 887 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 ANKRD20A4Q4UJ75 823 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 MSS51Q4VC12 460 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 ASCL5Q7RTU5 278 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 SPATS2Q86XZ4 545 aaKnown RBP13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 SDR16C5Q8N3Y7 309 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 GABPB2Q8TAK5 448 aaPredicted RBP13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 HDAC10Q969S8 669 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 MFSD3Q96ES6 412 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 ZNF514Q96K75 400 aaPredicted RBP13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 ZNF778Q96MU6 729 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 ELF4Q99607 663 aaPredicted RBP13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 HINFPQ9BQA5 517 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 LGR4Q9BXB1 951 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 ZDHHC18Q9NUE0 388 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 KLQ9UEF7 1012 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 RAPGEFL1Q9UHV5 662 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 SNX11Q9Y5W9 270 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 MAD1L1Q9Y6D9 718 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 RPS6KL1Q9Y6S9 549 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 FAM169AQ9Y6X4 670 aa13.71□□□□□ -0.21
NSMCE1-201ENST00000361439 SCN8AQ9UQD0 1980 aa13.71□□□□□ -0.22
NSMCE1-201ENST00000361439 ZCWPW2A0A1B0GU75 182 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 LNP1A1A4G5 178 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 H3BM21 787 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 PFDN6O15212 129 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 IVLP07476 585 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 RALBP11234 206 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 NME1P15531 152 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 NMBRP28336 390 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 ARSDP51689 593 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 SRP54P61011 504 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 TMPRSS15P98073 1019 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms