RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 VPS51Q9UID3 782 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 GBF1Q92538 1859 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 NDUFS3O75489 264 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 SRP72O76094 671 aaKnown RBP22.5■■□□□ 1.19
LDB1-201ENST00000361198 MT-CO1P00395 513 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 CLTBP09497 229 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 ENO3P13929 434 aaPredicted RBP22.5■■□□□ 1.19
LDB1-201ENST00000361198 MTHFD2P13995 350 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 CSF2RAP15509 400 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 GRIA2P42262 883 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 HERVK_113P63132 956 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 MRPS22P82650 360 aaKnown RBP22.5■■□□□ 1.19
LDB1-201ENST00000361198 TLR1Q15399 786 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 RARS2Q5T160 578 aaKnown RBP22.5■■□□□ 1.19
LDB1-201ENST00000361198 CHSY3Q70JA7 882 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 ALG14Q96F25 216 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 FAR2Q96K12 515 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 ERVK-6Q9BXR3 956 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 MEAF6Q9HAF1 191 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 UTP6Q9NYH9 597 aaKnown RBP22.5■■□□□ 1.19
LDB1-201ENST00000361198 FNDC3AQ9Y2H6 1198 aaKnown RBP22.5■■□□□ 1.19
LDB1-201ENST00000361198 UBXN8O00124 270 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 ACOT8O14734 319 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 MC4RP32245 332 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 CDH13P55290 713 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 PKNOX1P55347 436 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 RHOAP61586 193 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 WDR5P61964 334 aaKnown RBP22.49■■□□□ 1.19
LDB1-201ENST00000361198 CDH18Q13634 790 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 ATXN7L2Q5T6C5 722 aaPredicted RBP22.49■■□□□ 1.19
LDB1-201ENST00000361198 CLEC6AQ6EIG7 209 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 CATSPER1Q8NEC5 780 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 ADCY4Q8NFM4 1077 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 RHEBL1Q8TAI7 183 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 ATOH8Q96SQ7 321 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 TCF12Q99081 682 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 TRMOQ9BU70 441 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 CCDC68Q9H2F9 335 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 MRGBPQ9NV56 204 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 TAS2R13Q9NYV9 303 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 RAB26Q9ULW5 256 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 TRAF6Q9Y4K3 522 aa22.49■■□□□ 1.19
LDB1-201ENST00000361198 PRSS51A0A1B0GVH4 220 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 TYW5A2RUC4 315 aaKnown RBP22.48■■□□□ 1.19
LDB1-201ENST00000361198 DNAJA2O60884 412 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 SIX3O95343 332 aaPredicted RBP22.48■■□□□ 1.19
LDB1-201ENST00000361198 RFC2P35250 354 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 CYP4F8P98187 520 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 PABPC1LQ4VXU2 614 aaKnown RBP22.48■■□□□ 1.19
LDB1-201ENST00000361198 CMTR2Q8IYT2 770 aaKnown RBP22.48■■□□□ 1.19
LDB1-201ENST00000361198 AFAP1L2Q8N4X5 818 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 PTGR2Q8N8N7 351 aaPredicted RBP22.48■■□□□ 1.19
LDB1-201ENST00000361198 LRGUKQ96M69 825 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 BIRC8Q96P09 236 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 PCDHB9Q9Y5E1 797 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 SLC4A7Q9Y6M7 1214 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 K7ERQ8 282 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 CFLARO15519 480 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 GABRR2P28476 465 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 PSMD8P48556 350 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 CLCN2P51788 898 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 PTPRNQ16849 979 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 GAREM2Q75VX8 874 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 ITIH5Q86UX2 942 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 TTC30BQ8N4P2 665 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 BHLHE22Q8NFJ8 381 aaPredicted RBP22.48■■□□□ 1.19
LDB1-201ENST00000361198 EPB41L1Q9H4G0 881 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 TFB2MQ9H5Q4 396 aaKnown RBP22.48■■□□□ 1.19
LDB1-201ENST00000361198 SYTL2Q9HCH5 934 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 GALPQ9UBC7 116 aa22.48■■□□□ 1.19
LDB1-201ENST00000361198 C15orf38-AP3S2A0A0A6YYH1 394 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 LRRC14BA6NHZ5 514 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 TXNDC9O14530 226 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 STX7O15400 261 aaKnown RBP22.47■■□□□ 1.19
LDB1-201ENST00000361198 OR1I1O60431 355 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 CA8P35219 290 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 PPP1R3AQ16821 1122 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 PFKFB4Q16877 469 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 ARPINQ7Z6K5 226 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 LILRA2Q8N149 483 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 GPR21Q99679 349 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 DNMT3BQ9UBC3 853 aaKnown RBP22.47■■□□□ 1.19
LDB1-201ENST00000361198 IKZF3Q9UKT9 509 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 PPP6CO00743 305 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 FZD6O60353 706 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 LILRB3O75022 631 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 PRAMEF12O95522 483 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 MSX2P35548 267 aaPredicted RBP22.47■■□□□ 1.19
LDB1-201ENST00000361198 CYHR1Q6ZMK1 362 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 APCDD1Q8J025 514 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 USP13Q92995 863 aaPredicted RBP22.47■■□□□ 1.19
LDB1-201ENST00000361198 TM6SF2Q9BZW4 377 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 Q9H521 79 aa22.47■■□□□ 1.19
LDB1-201ENST00000361198 STX16-NPEPL1H3BU86 382 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 TGM5O43548 720 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 INHBCP55103 352 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 SH3BP2P78314 561 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 EP400NLQ6ZTU2 488 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 KIAA1191Q96A73 305 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 SLC30A3Q99726 388 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms