RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 PRPSAP2O60256 369 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 ASMTLO95671 621 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 F8A1P23610 371 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 PSMA2P25787 234 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 OGDHQ02218 1023 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 FOXM1Q08050 763 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 TRAF2Q12933 501 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 IL11RAQ14626 422 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 CA9Q16790 459 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 DPCR1Q3MIW9 517 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 LRRC66Q68CR7 880 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 LYSMD3Q7Z3D4 306 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 TRIM74Q86UV6 250 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 CPT1CQ8TCG5 803 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 FNIP1Q8TF40 1166 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 SEC14L1Q92503 715 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 COX14Q96I36 57 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 KCTD15Q96SI1 283 aaPredicted RBP13.72□□□□□ -0.21
VPS29-201ENST00000360579 AGPAT1Q99943 283 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 SNRNP25Q9BV90 132 aaKnown RBP13.72□□□□□ -0.21
VPS29-201ENST00000360579 ZWILCHQ9H900 591 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 RMI1Q9H9A7 625 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 SAMSN1Q9NSI8 373 aaKnown RBP13.72□□□□□ -0.21
VPS29-201ENST00000360579 CD84Q9UIB8 345 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 TLK1Q9UKI8 766 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 DNPEPQ9ULA0 475 aa13.72□□□□□ -0.21
VPS29-201ENST00000360579 LILRA5A6NI73 299 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 K7EM74 188 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 KATNA1O75449 491 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 RNF8O76064 485 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 EML2O95834 649 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 MT-ND3P03897 115 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 CCNYL3P0C7X3 344 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 F3P13726 295 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 GNLYP22749 145 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 UQCRFS1P47985 274 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 KLK7P49862 253 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 HIST2H2BCQ6DN03 193 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 ACAD10Q6JQN1 1059 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 CYB5D1Q6P9G0 228 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 CHST15Q7LFX5 561 aaPredicted RBP13.71□□□□□ -0.21
VPS29-201ENST00000360579 APLFQ8IW19 511 aaPredicted RBP13.71□□□□□ -0.21
VPS29-201ENST00000360579 MCOLN2Q8IZK6 566 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 PGBD5Q8N414 524 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 PIH1D2Q8WWB5 315 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 SCAMP4Q969E2 229 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 TWSG1Q9GZX9 223 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 UCK1Q9HA47 277 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 PARVAQ9NVD7 372 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 CPNE7Q9UBL6 633 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 TBC1D29Q9UFV1 150 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 PCSK1NQ9UHG2 260 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 PCDHGA6Q9Y5G7 932 aa13.71□□□□□ -0.21
VPS29-201ENST00000360579 OAS3Q9Y6K5 1087 aaKnown RBP13.71□□□□□ -0.21
VPS29-201ENST00000360579 CENPEQ02224 2701 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 ITPR2Q14571 2701 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 PIPSLA2A3N6 862 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 CDC14CA4D256 554 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 A6NCN8 305 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 EPHB6O15197 1021 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 DNAJC6O75061 913 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 CREG1O75629 220 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 PEX11BO96011 259 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 C9P02748 559 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 CCDC172P0C7W6 258 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 CTPS1P17812 591 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 GARSP41250 739 aaKnown RBP13.7□□□□□ -0.22
VPS29-201ENST00000360579 MMP13P45452 471 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 EMP3P54852 163 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 CDH6P55285 790 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 PTSQ03393 145 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 DPYSQ14117 519 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 MARC1Q5VT66 337 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 TMCO3Q6UWJ1 677 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 PHYKPLQ8IUZ5 450 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 RASGRP3Q8IV61 690 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 ATPAF2Q8N5M1 289 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 GALNT6Q8NCL4 622 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 NEK11Q8NG66 645 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 C9orf72Q96LT7 481 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 CWC15Q9P013 229 aaKnown RBP13.7□□□□□ -0.22
VPS29-201ENST00000360579 PADI1Q9ULC6 663 aa13.7□□□□□ -0.22
VPS29-201ENST00000360579 GOLGA6L3A6NEY3 463 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 C21orf140B9A014 251 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 H3BRJ5 948 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 SNX2O60749 519 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 KIAA0754O94854 1291 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 NDUFA10O95299 355 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 DDAH2O95865 285 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 FURINP09958 794 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 ATP1A3P13637 1013 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 ACP5P13686 325 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 ZNF28P17035 718 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 TNFAIP3P21580 790 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 MIPP30301 263 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 CASP14P31944 242 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 ARL4AP40617 200 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 STC1P52823 247 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 EPHB1P54762 984 aa13.69□□□□□ -0.22
VPS29-201ENST00000360579 MAXP61244 160 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms