RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 KLHL25Q9H0H3 589 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 MAGEL2Q9UJ55 1249 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 COPG1Q9Y678 874 aaKnown RBP16.26■□□□□ 0.19
SCAF1-201ENST00000360565 MYO9BQ13459 2157 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 J3KR12 359 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 CNPP09543 421 aaKnown RBP16.26■□□□□ 0.19
SCAF1-201ENST00000360565 RPL17P18621 184 aaKnown RBP16.26■□□□□ 0.19
SCAF1-201ENST00000360565 GRK3P35626 688 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 GNPDA1P46926 289 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 MAPKAPK2P49137 400 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 RPS24P62847 133 aaKnown RBP16.26■□□□□ 0.19
SCAF1-201ENST00000360565 KRT84Q9NSB2 600 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 ADGRE2Q9UHX3 823 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 EIF2B4Q9UI10 523 aaKnown RBP16.26■□□□□ 0.19
SCAF1-201ENST00000360565 DAPK2Q9UIK4 370 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 COL2A1P02458 1487 aaPredicted RBP16.26■□□□□ 0.19
SCAF1-201ENST00000360565 A0A1B0GVM2 712 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 TCAF2A6NFQ2 919 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 A8MT66 165 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 PDZK1P1A8MUH7 402 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 EDN1P05305 212 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 FGF3P11487 239 aaPredicted RBP16.26■□□□□ 0.19
SCAF1-201ENST00000360565 FBXL22Q6P050 247 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 CYP4Z1Q86W10 505 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 UPF1Q92900 1129 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCAF1-201ENST00000360565 TUBGCP5Q96RT8 1024 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 ALG2Q9H553 416 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 DNAJB4Q9UDY4 337 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 COL18A1P39060 1754 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 TRAV19A0A0A6YYK7 116 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 H3BN98 237 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 ARHGEF9O43307 516 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 BEST1O76090 585 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 GSNP06396 782 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 HPCAL1P37235 193 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 SOX4Q06945 474 aaPredicted RBP16.26■□□□□ 0.19
SCAF1-201ENST00000360565 TAPT1Q6NXT6 567 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 DOK6Q6PKX4 331 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 C6orf62Q9GZU0 229 aaPredicted RBP16.26■□□□□ 0.19
SCAF1-201ENST00000360565 CAPN1P07384 714 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 IQCF3P0C7M6 154 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 SOX6P35712 828 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 ANXA11P50995 505 aaKnown RBP16.25■□□□□ 0.19
SCAF1-201ENST00000360565 XKR6Q5GH73 641 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 FBXL19Q6PCT2 694 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 PRR11Q96HE9 360 aaPredicted RBP16.25■□□□□ 0.19
SCAF1-201ENST00000360565 FUBP3Q96I24 572 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCAF1-201ENST00000360565 APOLD1Q96LR9 279 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 COQ10BQ9H8M1 238 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 ADAMTS5Q9UNA0 930 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 DMTF1Q9Y222 760 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 LRRC42Q9Y546 428 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 GMPRP36959 345 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 PAQR3Q6TCH7 311 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 CERS6Q6ZMG9 384 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 GMPPBQ9Y5P6 360 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 LTBP3Q9NS15 1303 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 FAM220BPB1ANY3 271 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 SYN3O14994 580 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 PRAMEF1O95521 474 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 CKMT2P17540 419 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 PPP2R1BP30154 601 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 CCR10P46092 362 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 SPIDRQ14159 915 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 KBTBD2Q8IY47 623 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 DBF4BQ8NFT6 615 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 STARD8Q92502 1023 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 ZNF490Q9ULM2 529 aaPredicted RBP16.25■□□□□ 0.19
SCAF1-201ENST00000360565 PCDHB1Q9Y5F3 818 aa16.25■□□□□ 0.19
SCAF1-201ENST00000360565 CITO14578 2027 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 ZNF487B1APH4 448 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 STK16O75716 305 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 STBD1O95210 358 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 NCK1P16333 377 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 GHRHRQ02643 423 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 ITGADQ13349 1161 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 EPGNQ6UW88 154 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 RPS27LQ71UM5 84 aaKnown RBP16.24■□□□□ 0.19
SCAF1-201ENST00000360565 PROSER1Q86XN7 944 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 ATL1Q8WXF7 558 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 CYP2S1Q96SQ9 504 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 SLC39A3Q9BRY0 314 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 TLR6Q9Y2C9 796 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 ANKRD12Q6UB98 2062 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 ITGB4P16144 1822 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 GABRDO14764 452 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 PRKCGP05129 697 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 UROSP10746 265 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 CDH4P55283 916 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 INO80DQ53TQ3 878 aaPredicted RBP16.24■□□□□ 0.19
SCAF1-201ENST00000360565 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 UBE2R2Q712K3 238 aaPredicted RBP16.24■□□□□ 0.19
SCAF1-201ENST00000360565 SATL1Q86VE3 508 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 C1orf21Q9H246 121 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 NMUR1Q9HB89 426 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 SAMHD1Q9Y3Z3 626 aaKnown RBP16.24■□□□□ 0.19
SCAF1-201ENST00000360565 HS3ST4Q9Y661 456 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 GLYATL1P3A0A0U1RQE8 302 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 FAM163BP0C2L3 166 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 OCM2P0CE71 109 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms