RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 GALNT11Q8NCW6 608 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 ZNF486Q96H40 463 aaPredicted RBP9.91□□□□□ -0.82
SIN3A-201ENST00000360439 MAGEB5Q9BZ81 275 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 PNPLA8Q9NP80 782 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 RAD54BQ9Y620 910 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 UBR3Q6ZT12 1888 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 WNK3Q9BYP7 1800 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 FAM237BA0A1B0GVD1 139 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 BCLAF3A2AJT9 711 aaKnown RBP9.91□□□□□ -0.82
SIN3A-201ENST00000360439 H7C2Y5 167 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 CLDN5O00501 218 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 ULK1O75385 1050 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 OAZ2O95190 189 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 UQCRC1P31930 480 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 RFC2P35250 354 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 ATP5C1P36542 298 aaKnown RBP9.91□□□□□ -0.82
SIN3A-201ENST00000360439 RPP30P78346 268 aaKnown RBP9.91□□□□□ -0.82
SIN3A-201ENST00000360439 MOGSQ13724 837 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 FNBP1LQ5T0N5 605 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 CA5BP1Q8WTZ4 195 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 DHRS9Q9BPW9 319 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 NUSAP1Q9BXS6 441 aaKnown RBP9.91□□□□□ -0.82
SIN3A-201ENST00000360439 CADM1Q9BY67 442 aaKnown RBP9.91□□□□□ -0.82
SIN3A-201ENST00000360439 EFCAB1Q9HAE3 211 aa9.91□□□□□ -0.82
SIN3A-201ENST00000360439 A0A0U1RQF3 1178 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 KANSL1LA0AUZ9 987 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 KPNA5O15131 536 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 MLNP12872 115 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 GBE1Q04446 702 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 C1orf94Q6P1W5 598 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 PRSS55Q6UWB4 352 aaPredicted RBP9.9□□□□□ -0.82
SIN3A-201ENST00000360439 RDH11Q8TC12 318 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 AUTS2Q8WXX7 1259 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 CDHR5Q9HBB8 845 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 PRMT8Q9NR22 394 aaPredicted RBP9.9□□□□□ -0.82
SIN3A-201ENST00000360439 ING3Q9NXR8 418 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 SLC17A7Q9P2U7 560 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 PCDHB8Q9UN66 801 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 AP4E1Q9UPM8 1137 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 TRAV19A0A0A6YYK7 116 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 CALCAP01258 141 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 BPGMP07738 259 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 IQCF3P0C7M6 154 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 THEGLP0DJG4 465 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 CREB1P16220 341 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 SLC6A3Q01959 620 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 BST1Q10588 318 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 PRKD1Q15139 912 aaPredicted RBP9.9□□□□□ -0.82
SIN3A-201ENST00000360439 SMAD1Q15797 465 aaKnown RBP9.9□□□□□ -0.82
SIN3A-201ENST00000360439 TYSND1Q2T9J0 566 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 ATP13A4Q4VNC1 1196 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 STXBP5Q5T5C0 1151 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 USP43Q70EL4 1123 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 SERINC5Q86VE9 423 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 EFHBQ8N7U6 833 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 C12orf29Q8N999 325 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 NAT8LQ8N9F0 302 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 SNX31Q8N9S9 440 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 S100PBPQ96BU1 408 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 RNF39Q9H2S5 420 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 FZD8Q9H461 694 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 POLE3Q9NRF9 147 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 TBC1D13Q9NVG8 400 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 GTSE1Q9NYZ3 720 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 ADA2Q9NZK5 511 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 MARCH2Q9P0N8 246 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 GJD2Q9UKL4 321 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 ISPDA4D126 451 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 TBC1D3BA6NDS4 549 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 CAPN8A6NHC0 703 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 CAPN14A8MX76 684 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 ZNF197O14709 1029 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 SRP72O76094 671 aaKnown RBP9.9□□□□□ -0.82
SIN3A-201ENST00000360439 CCNA2P20248 432 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 CCR1P32246 355 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 FAM189A2Q15884 450 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 NRF1Q16656 503 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 SEL1L3Q68CR1 1132 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 KYQ8NBH2 561 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 VPS33AQ96AX1 596 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 EBNA1BP2Q99848 306 aaKnown RBP9.9□□□□□ -0.82
SIN3A-201ENST00000360439 C6orf62Q9GZU0 229 aaPredicted RBP9.9□□□□□ -0.82
SIN3A-201ENST00000360439 TASP1Q9H6P5 420 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 POLR1BQ9H9Y6 1135 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 GPATCH2LQ9NWQ4 482 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 IMPAD1Q9NX62 359 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 PRPF19Q9UMS4 504 aaKnown RBP9.9□□□□□ -0.82
SIN3A-201ENST00000360439 DGKBQ9Y6T7 804 aa9.9□□□□□ -0.82
SIN3A-201ENST00000360439 RNASEH1O60930 286 aaKnown RBP9.9□□□□□ -0.83
SIN3A-201ENST00000360439 NPR3P17342 541 aa9.9□□□□□ -0.83
SIN3A-201ENST00000360439 OGNP20774 298 aaKnown RBP9.9□□□□□ -0.83
SIN3A-201ENST00000360439 RBL1P28749 1068 aa9.9□□□□□ -0.83
SIN3A-201ENST00000360439 NUDT2P50583 147 aa9.9□□□□□ -0.83
SIN3A-201ENST00000360439 LGALS3BPQ08380 585 aa9.9□□□□□ -0.83
SIN3A-201ENST00000360439 PHKG1Q16816 387 aa9.9□□□□□ -0.83
SIN3A-201ENST00000360439 PAGE2BQ5JRK9 111 aa9.9□□□□□ -0.83
SIN3A-201ENST00000360439 RFWD3Q6PCD5 774 aa9.9□□□□□ -0.83
SIN3A-201ENST00000360439 TDRD5Q8NAT2 981 aaKnown RBP9.9□□□□□ -0.83
SIN3A-201ENST00000360439 HTR3CQ8WXA8 447 aa9.9□□□□□ -0.83
SIN3A-201ENST00000360439 HDAC11Q96DB2 347 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms