RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 LSM14AQ8ND56 463 aaKnown RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 SNX33Q8WV41 574 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 MRPL45Q9BRJ2 306 aaKnown RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 MLXQ9UH92 298 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 EPHB6O15197 1021 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 PTGES3Q15185 160 aaKnown RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 PIWIL4Q7Z3Z4 852 aaKnown RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 FAM129CQ86XR2 697 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 RAVER1Q8IY67 606 aaKnown RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 OR5T3Q8NGG3 340 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 LRTOMTQ8WZ04 291 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 TBC1D17Q9HA65 648 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 RRAGCQ9HB90 399 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 TULP4Q9NRJ4 1543 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 IRGMA1A4Y4 181 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 XKRYO14609 159 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 CHST10O43529 356 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 SLC35G4P0C7Q5 338 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 LPOP22079 712 aaPredicted RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 KCNA5P22460 613 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 DUPD1Q68J44 220 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 ZPBP2Q6X784 338 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 RTL4Q6ZR62 310 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 FAM35AQ86V20 835 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 OR2T34Q8NGX1 318 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 OR2T3Q8NH03 318 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 NCANO14594 1321 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 DNTTP04053 509 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 TXNL4AP83876 142 aaKnown RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 CBX2Q14781 532 aaPredicted RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 BEND5Q7L4P6 421 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 ERCC6L2Q5T890 1561 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 DPPA5A6NC42 116 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 HDCP19113 662 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 OLR1P78380 273 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 LINGO2Q7L985 606 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 THAP5Q7Z6K1 395 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 KIAA0319LQ8IZA0 1049 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 XAGE5Q8WWM1 108 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 RBM4BQ9BQ04 359 aaKnown RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 RBM4Q9BWF3 364 aaKnown RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 AGO1Q9UL18 857 aaKnown RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 MBD5Q9P267 1494 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 HCN1O60741 890 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 MATN4O95460 622 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 LIPEQ05469 1076 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 APOLD1Q96LR9 279 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 LRRC19Q9H756 370 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 PNPLA8Q9NP80 782 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 DNAJC11Q9NVH1 559 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 KDM4BO94953 1096 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 SHMT1P34896 483 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 MAGEA2P43356 314 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 CXCR3P49682 368 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 EIF2S3LQ2VIR3 472 aaKnown RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 TNFAIP8L3Q5GJ75 292 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 CCNYL2Q5T2Q4 361 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 ZZZ3Q8IYH5 903 aa15.97■□□□□ 0.15
COL18A1-203ENST00000359759 HJURPQ8NCD3 748 aaPredicted RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 PURBQ96QR8 312 aaKnown RBP15.97■□□□□ 0.15
COL18A1-203ENST00000359759 TRBV23OR9-2A0A075B6M9 112 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 hCG_2039718K7EN88 272 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 PTGS2P35354 604 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 SSR2P43308 183 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 SMARCD3Q6STE5 483 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 SPATA19Q7Z5L4 167 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 GHDCQ8N2G8 530 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 DCBLD1Q8N8Z6 715 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 LRRC20Q8TCA0 184 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 ACMSDQ8TDX5 336 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 CCDC28BQ9BUN5 200 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 WFS1O76024 890 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 BPGMP07738 259 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 IGFBP4P22692 258 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 EPHX2P34913 555 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 CCR10P46092 362 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 CCNHP51946 323 aaPredicted RBP15.96■□□□□ 0.15
COL18A1-203ENST00000359759 FMO1Q01740 532 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 SMARCB1Q12824 385 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 CRY2Q49AN0 593 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 ADCY4Q8NFM4 1077 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 AP2M1Q96CW1 435 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 C3orf14Q9HBI5 128 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 ASTN1O14525 1302 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 FGBP02675 491 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 ZNF155Q12901 538 aaPredicted RBP15.96■□□□□ 0.15
COL18A1-203ENST00000359759 IDNKQ5T6J7 187 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 C9orf131Q5VYM1 1079 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 RHBDF2Q6PJF5 856 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 CHST15Q7LFX5 561 aaPredicted RBP15.96■□□□□ 0.15
COL18A1-203ENST00000359759 COPS5Q92905 334 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 USP41Q3LFD5 358 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 CPSF7Q8N684 471 aaKnown RBP15.96■□□□□ 0.15
COL18A1-203ENST00000359759 HOPXQ9BPY8 73 aaPredicted RBP15.96■□□□□ 0.15
COL18A1-203ENST00000359759 EBPLQ9BY08 206 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 TIMMDC1Q9NPL8 285 aa15.96■□□□□ 0.15
COL18A1-203ENST00000359759 INTS10Q9NVR2 710 aaKnown RBP15.96■□□□□ 0.15
COL18A1-203ENST00000359759 EDF1O60869 148 aaKnown RBP15.96■□□□□ 0.14
COL18A1-203ENST00000359759 CASP9P55211 416 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms