RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 VWC2Q2TAL6 325 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 TTC38Q5R3I4 469 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 RIPPLY2Q5TAB7 128 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 GRTP1Q5TC63 336 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 C16orf87Q6PH81 154 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 MARK2Q7KZI7 788 aaKnown RBP1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 TAOK1Q7L7X3 1001 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 BHLHA15Q7RTS1 189 aaPredicted RBP1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 CPXM2Q8N436 756 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 SUMF1Q8NBK3 374 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 ATAD1Q8NBU5 361 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 PDPRQ8NCN5 879 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCHCR1Q8TD31 782 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 MSI2Q96DH6 328 aaKnown RBP1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 NUSAP1Q9BXS6 441 aaKnown RBP1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 WDR11Q9BZH6 1224 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 GAB2Q9UQC2 676 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 CAMK2AQ9UQM7 478 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 A0A0G2JK05 382 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 FAM149AA5PLN7 773 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 CES2O00748 559 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 SLC22A1O15245 554 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 NPHP1O15259 732 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 H2AFB1P0C5Y9 115 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 H2AFB2P0C5Z0 115 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 CEACAM1P13688 526 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 MX2P20592 715 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 CYP3A5P20815 502 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 PON1P27169 355 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 HNRNPMP52272 730 aaKnown RBP eCLIP1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 CD83Q01151 205 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 HSP90AB3PQ58FF7 597 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 FBXW10Q5XX13 1052 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 NADSYN1Q6IA69 706 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 TEX38Q6PEX7 206 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 PRSS42Q7Z5A4 293 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 ADGRD2Q7Z7M1 963 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZDHHC17Q8IUH5 632 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 TMEM57Q8N5G2 664 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 POC5Q8NA72 575 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 UTP15Q8TED0 518 aaKnown RBP1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 THUMPD2Q9BTF0 503 aaKnown RBP1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 AMBRA1Q9C0C7 1298 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZFP14Q9HCL3 533 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 HOMER3Q9NSC5 361 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 PANK4Q9NVE7 773 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 IL17BQ9UHF5 180 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 PCDHA12Q9UN75 941 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 PCDHA1Q9Y5I3 950 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 HEMK1Q9Y5R4 338 aaPredicted RBP1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 GMEB1Q9Y692 573 aa1.87□□□□□ -2.11
SMARCAD1-202ENST00000359052 A0A1W2PQ45 241 aaPredicted RBP1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 A0A1W2PQY0 241 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 CXorf49A8MYA2 514 aaPredicted RBP1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 SIGLEC5O15389 551 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 CDK14O94921 469 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 GASTP01350 101 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 TROVE2P10155 538 aaKnown RBP eCLIP1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 BMP2P12643 396 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 CPN1P15169 458 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZNF24P17028 368 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 SSTR1P30872 391 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 UGT1A3P35503 534 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 HARS2P49590 506 aaKnown RBP1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 GALK2Q01415 458 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 RNPS1Q15287 305 aaKnown RBP1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 TCTE1Q5JU00 501 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 HIST2H2BCQ6DN03 193 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 HIST2H2BDQ6DRA6 164 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 OR52E8Q6IFG1 317 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 PAPD4Q6PIY7 484 aaKnown RBP1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 BICDL1Q6ZP65 573 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 IGFN1Q86VF2 1251 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 FAM20CQ8IXL6 584 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 LRRC75A-AS1Q8N1F1 130 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 PRCCQ92733 491 aaPredicted RBP1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 DCTPP1Q9H773 170 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 Q9H8V8 135 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 SARS2Q9NP81 518 aaKnown RBP1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 BARHL2Q9NY43 387 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZNHIT2Q9UHR6 403 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 VPS13AQ96RL7 3174 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 NID2Q14112 1375 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 SPATA31A6Q5VVP1 1343 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCDC171Q6TFL3 1326 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 MYBBP1AQ9BQG0 1328 aaKnown RBP1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCDC187A0A096LP49 1063 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 FAM230AA0A1W2PPH8 454 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 KANSL1LA0AUZ9 987 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 HTR3EA5X5Y0 456 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 PIP5K1BO14986 540 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 MYO1BO43795 1136 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 PPP6R2O75170 966 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 HMMRO75330 724 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 ABCB1P08183 1280 aaPredicted RBP1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 RFPL3SP0C7P2 107 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 GBP1P32455 592 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 ARL1P40616 181 aaPredicted RBP1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 DMWDQ09019 674 aa1.86□□□□□ -2.11
SMARCAD1-202ENST00000359052 KRT71Q3SY84 523 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms