RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 CACHD1Q5VU97 1274 aa14.18□□□□□ -0.14
SIRPA-202ENST00000358771 TAS1R1Q7RTX1 841 aa14.18□□□□□ -0.14
SIRPA-202ENST00000358771 SPPL2CQ8IUH8 684 aa14.18□□□□□ -0.14
SIRPA-202ENST00000358771 MED8Q96G25 268 aa14.18□□□□□ -0.14
SIRPA-202ENST00000358771 MYO19Q96H55 970 aa14.18□□□□□ -0.14
SIRPA-202ENST00000358771 FEM1CQ96JP0 617 aa14.18□□□□□ -0.14
SIRPA-202ENST00000358771 TLE6Q9H808 572 aa14.18□□□□□ -0.14
SIRPA-202ENST00000358771 CD84Q9UIB8 345 aa14.18□□□□□ -0.14
SIRPA-202ENST00000358771 SLC25A13Q9UJS0 675 aa14.18□□□□□ -0.14
SIRPA-202ENST00000358771 NPHS1O60500 1241 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 LYNP07948 512 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 KCNA5P22460 613 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 FASP25445 335 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 RAP1GDS1P52306 607 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 AASDHQ4L235 1098 aaPredicted RBP14.17□□□□□ -0.14
SIRPA-202ENST00000358771 C6orf52Q5T4I8 152 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 FAM126AQ9BYI3 521 aaPredicted RBP14.17□□□□□ -0.14
SIRPA-202ENST00000358771 CREBZFQ9NS37 354 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 E7ENX8 843 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 COCHO43405 550 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 CSKP41240 450 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 ATP6V0D1P61421 351 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 REP15Q6BDI9 236 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 RALGPS2Q86X27 583 aaPredicted RBP14.17□□□□□ -0.14
SIRPA-202ENST00000358771 SH3KBP1Q96B97 665 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 NSMCE2Q96MF7 247 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 SMG9Q9H0W8 520 aaKnown RBP14.17□□□□□ -0.14
SIRPA-202ENST00000358771 AKTIPQ9H8T0 292 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 LMCD1Q9NZU5 365 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 POLG2Q9UHN1 485 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 YIPF1Q9Y548 306 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 C2orf78A6NCI8 922 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 ADAM12O43184 909 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 KIF1CO43896 1103 aaKnown RBP14.17□□□□□ -0.14
SIRPA-202ENST00000358771 ZNF33AQ06730 810 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 ASB2Q96Q27 587 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 HAUS8Q9BT25 410 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 PLAC1Q9HBJ0 212 aa14.17□□□□□ -0.14
SIRPA-202ENST00000358771 DDX18Q9NVP1 670 aaKnown RBP14.17□□□□□ -0.14
SIRPA-202ENST00000358771 GPR39O43194 453 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 PRAMEF11O60813 436 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 FAM58BPP0C7Q3 252 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 MZF1P28698 734 aaPredicted RBP14.16□□□□□ -0.14
SIRPA-202ENST00000358771 SEMA3BQ13214 749 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 LYSMD3Q7Z3D4 306 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 FBXO30Q8TB52 745 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 ABTB1Q969K4 478 aaPredicted RBP14.16□□□□□ -0.14
SIRPA-202ENST00000358771 BBS2Q9BXC9 721 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 ATP13A3Q9H7F0 1226 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 SHROOM3Q8TF72 1996 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 A0A1W2PRU2 124 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 SERPIND1P05546 499 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 IMPDH1P20839 514 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 AGTR2P50052 363 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 LCP2Q13094 533 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 PTPRRQ15256 657 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 ZIK1Q3SY52 487 aaPredicted RBP14.16□□□□□ -0.14
SIRPA-202ENST00000358771 STK40Q8N2I9 435 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 FIBCD1Q8N539 461 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.16□□□□□ -0.14
SIRPA-202ENST00000358771 C1orf74Q96LT6 269 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 DYRK4Q9NR20 520 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 ANKRD66B4E2M5 251 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 NEDD8-MDP1E9PL57 170 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 LRATO95237 230 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 CPSF4O95639 269 aaKnown RBP14.16□□□□□ -0.14
SIRPA-202ENST00000358771 CTGFP29279 349 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 CHRNB3Q05901 458 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 SULT2A1Q06520 285 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 SMARCB1Q12824 385 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 KCTD11Q693B1 232 aa14.16□□□□□ -0.14
SIRPA-202ENST00000358771 RTN4RL1Q86UN2 441 aaPredicted RBP14.16□□□□□ -0.14
SIRPA-202ENST00000358771 CORO1CQ9ULV4 474 aaPredicted RBP14.16□□□□□ -0.14
SIRPA-202ENST00000358771 ARHGAP10A1A4S6 786 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 CCL16O15467 120 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 CXCL14O95715 111 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 MLYCDO95822 493 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 CAPN1P07384 714 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 UQCRBP14927 111 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 NCK1P16333 377 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 CDKN1CP49918 316 aaPredicted RBP14.15□□□□□ -0.14
SIRPA-202ENST00000358771 MTA1Q13330 715 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 TMEM173Q86WV6 379 aaPredicted RBP14.15□□□□□ -0.14
SIRPA-202ENST00000358771 MAGEE2Q8TD90 523 aaPredicted RBP14.15□□□□□ -0.14
SIRPA-202ENST00000358771 EEF1AKMT1Q8WVE0 214 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 LRTOMTQ8WZ04 291 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 UNC93B1Q9H1C4 597 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 LIMD1Q9UGP4 676 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 CNTRLQ7Z7A1 2325 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 PPP6CO00743 305 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 ZNF197O14709 1029 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 B4GALT3O60512 393 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 ECI2O75521 394 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 MYO1DO94832 1006 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 S1PR4O95977 384 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 ALBP02768 609 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 HERVK_113P63132 956 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 DLG1Q12959 904 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 PRKG2Q13237 762 aa14.15□□□□□ -0.14
SIRPA-202ENST00000358771 KRT33BQ14525 404 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms