RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 BTN3A1O00481 513 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 FABP3P05413 133 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 C7P10643 843 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PCSK1P29120 753 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CRATP43155 626 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PDIA6Q15084 440 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 GCNT6Q5T4J0 391 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 BRSK2Q8IWQ3 736 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 METTL6Q8TCB7 284 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 C1GALT1C1Q96EU7 318 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 NMRK2Q9NPI5 230 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 FRMPD1Q5SYB0 1578 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 RASAL1O95294 804 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PGLSO95336 258 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ARHGEF7Q14155 803 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ATP6AP1Q15904 470 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 SPATS1Q496A3 300 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ATP13A4Q4VNC1 1196 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 XRRA1Q6P2D8 792 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 MMAAQ8IVH4 418 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CLIP4Q8N3C7 705 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 C10orf53Q8N6V4 93 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ADGRE2Q9UHX3 823 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 KCNH4Q9UQ05 1017 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 DHX15O43143 795 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 NR3C2P08235 984 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CPB1P15086 417 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PPP2R1BP30154 601 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 NKAPQ8N5F7 415 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 LRRN4Q8WUT4 740 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CELF1Q92879 486 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 AURKBQ96GD4 344 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 TXLNGYQ9BZA5 131 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ADAMTS6Q9UKP5 1117 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CNOT11Q9UKZ1 510 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 DISP2A7MBM2 1401 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PGRMC2O15173 223 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 FAM156AQ8NDB6 213 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 C11orf24Q96F05 449 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 IL22Q9GZX6 179 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PAK1IP1Q9NWT1 392 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ZC3H4Q9UPT8 1303 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 AP3D1O14617 1153 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 GCATO75600 419 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 GSTM2P28161 218 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PTPN5P54829 565 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 SMCO1Q147U7 214 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 NPTX1Q15818 432 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CRY1Q16526 586 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 SLC34A3Q8N130 599 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PHF10Q8WUB8 498 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 DCPSQ96C86 337 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 SLC7A6OSQ96CW6 309 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 FRMD6Q96NE9 622 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 XKR8Q9H6D3 395 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PRMT5O14744 637 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 MLYCDO95822 493 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ENDOUP21128 410 aaKnown RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CDKN2BP42772 138 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 MBLAC2Q68D91 279 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 GADL1Q6ZQY3 521 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ZZZ3Q8IYH5 903 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ITM2CQ9NQX7 267 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 RGS14O43566 566 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 MPZL2O60487 215 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 S100A2P29034 98 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 SNAPC1Q16533 368 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PPM1JQ5JR12 505 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CREB3L1Q96BA8 519 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 MTFR1LQ9H019 292 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 SLC2A2P11168 524 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 HOXC8P31273 242 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CBLBQ13191 982 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 RNF219Q5W0B1 726 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 PTCHD4Q6ZW05 846 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 TEX47Q8TBZ9 253 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 SPATA9Q9BWV2 254 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 SMURF1Q9HCE7 757 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 C11orf16Q9NQ32 467 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 METTL21EPA6NDL7 271 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 DCAF8L1A6NGE4 600 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 FFAR3O14843 346 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 GPR42O15529 346 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 FMO4P31512 558 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 DRICH1Q6PGQ1 229 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF781Q8N8C0 355 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CRELD1Q96HD1 420 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 AKAP7Q9P0M2 348 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-203ENST00000358544 CLEC4AQ9UMR7 237 aa6.05□□□□□ -1.44
VPS13B-203ENST00000358544 C2orf81A6NN90 581 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 M0R036 132 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SLC30A4O14863 429 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 KPNA6O60684 536 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 FUCA1P04066 466 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CYP2A13Q16696 494 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 DNAJB9Q9UBS3 223 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 H3BM21 787 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 DNAJB5O75953 348 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SLC6A3Q01959 620 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms