RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ROGDIQ9GZN7 287 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 NOL6Q9H6R4 1146 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 RUBCNLQ9H714 662 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 PRDM16Q9HAZ2 1276 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 ABCB10Q9NRK6 738 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 IGSF5Q9NSI5 407 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 INTS7Q9NVH2 962 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 SLAMF8Q9P0V8 285 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 ZNHIT2Q9UHR6 403 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 EIF2B4Q9UI10 523 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 ATP11BQ9Y2G3 1177 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 POLR3HQ9Y535 204 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 MCM3APO60318 1980 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 A0A1W2PQH9 124 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 C17orf102A2RUQ5 167 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CCDC162PA2VCL2 907 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TTC36A6NLP5 189 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 H0Y626 953 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 PDHXO00330 501 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 STX7O15400 261 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 VPS26AO75436 327 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TRIM16O95361 564 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 NADKO95544 446 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 FTH1P02794 183 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CYBBP04839 570 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 FYNP06241 537 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 THRBP10828 461 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 IRF1P10914 325 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 IDO1P14902 403 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 JAK1P23458 1154 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 MAGEA10P43363 369 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 OR1G1P47890 313 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 HERVK_113P63132 956 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 RPL38P63173 70 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 PRKG2Q13237 762 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 PTRHD1Q6GMV3 140 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 PIWIL3Q7Z3Z3 882 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TLK2Q86UE8 772 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TMEM126BQ8IUX1 230 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 KIAA2013Q8IYS2 634 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TBC1D21Q8IYX1 336 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 LZTR1Q8N653 840 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 ROPN1LQ96C74 230 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 BIRC7Q96CA5 298 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 MRGPRX2Q96LB1 330 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 ERVK-6Q9BXR3 956 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 SYTL2Q9HCH5 934 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CCM2LQ9NUG4 571 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CMTM6Q9NX76 183 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 POLG2Q9UHN1 485 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 GJD2Q9UKL4 321 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 NRXN2Q9P2S2 1712 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 UBFD1O14562 309 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TNPO2O14787 897 aaKnown RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 ZSCAN9O15535 394 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 GJB3O75712 270 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 C8BP07358 591 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 SERPINF2P08697 491 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CD247P20963 164 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TTKP33981 857 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 SEPHS1P49903 392 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 ARHGDIAP52565 204 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 PFKPQ01813 784 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 DNASE1L3Q13609 305 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TIGD5Q53EQ6 642 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 GNASQ5JWF2 1037 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 CCNYL2Q5T2Q4 361 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 OTUD1Q5VV17 481 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 PAQR9Q6ZVX9 377 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 LRRC8DQ7L1W4 858 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 GLT6D1Q7Z4J2 308 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 GPSM1Q86YR5 675 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 HS3ST5Q8IZT8 346 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 SLC15A4Q8N697 577 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 ZBTB8BQ8NAP8 495 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-203ENST00000358528 OR7A2PQ8NGA2 310 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 OR4K2Q8NGD2 314 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 OR4L1Q8NH43 312 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 OR10A6Q8NH74 314 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 PSMA8Q8TAA3 256 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 HTRA1Q92743 480 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TFAP2CQ92754 450 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TMBIM1Q969X1 311 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 PTERQ96BW5 349 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TAMM41Q96BW9 452 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 RANBP9Q96S59 729 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 TRMOQ9BU70 441 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 ANKRD60Q9BZ19 345 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 MEAF6Q9HAF1 191 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 POLE4Q9NR33 117 aa6.54□□□□□ -1.36
CSDE1-203ENST00000358528 A0A0U1RQS6 177 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 AQP12BA6NM10 295 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 G3V2T6 193 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 CBX4O00257 560 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 KPNA4O00629 521 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 CXCL11O14625 94 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 CNTN5O94779 1100 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 STAU1O95793 577 aaKnown RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 WARSP23381 471 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms