RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 CDK16Q00536 496 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 SEMG2Q02383 582 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 TLE3Q04726 772 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 AUHQ13825 339 aaKnown RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 PDK1Q15118 436 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 CCDC142Q17RM4 750 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 HLA-BQ31612 363 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 PREPLQ4J6C6 727 aaPredicted RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 ATP13A4Q4VNC1 1196 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 TAF1BQ53T94 588 aaPredicted RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 SLC45A4Q5BKX6 768 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 LY6G5CQ5SRR4 150 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 EGFLAMQ63HQ2 1017 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 NUGGCQ68CJ6 796 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 HIBCHQ6NVY1 386 aaPredicted RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 SCYL2Q6P3W7 929 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 ZDHHC24Q6UX98 284 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 GSTA5Q7RTV2 222 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 ANKS1BQ7Z6G8 1248 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 ADAT2Q7Z6V5 191 aaKnown RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 TAC4Q86UU9 113 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 FAM131BQ86XD5 332 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 DDX42Q86XP3 938 aaKnown RBP eCLIP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 SLITRK4Q8IW52 837 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 IQCKQ8N0W5 287 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 PCDH19Q8TAB3 1148 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 IFT81Q8WYA0 676 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 ATG4AQ8WYN0 398 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 NKD1Q969G9 470 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 AZIN2Q96A70 460 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 WBP1Q96G27 269 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 MRGPRX1Q96LB2 322 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 RUFY1Q96T51 708 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 GABRG3Q99928 467 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 SH3GL2Q99962 352 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 TRIM51Q9BSJ1 452 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 TMEM109Q9BVC6 243 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 CDADC1Q9BWV3 514 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 PABPC3Q9H361 631 aaKnown RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 DHX35Q9H5Z1 703 aaKnown RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 WDCPQ9H6R7 721 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 EIF2B3Q9NR50 452 aaKnown RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 IGSF5Q9NSI5 407 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 PIGVQ9NUD9 493 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 KLHL11Q9NVR0 708 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 PAK5Q9P286 719 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 PPARGC1AQ9UBK2 798 aaKnown RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 FETUBQ9UGM5 382 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 DNPEPQ9ULA0 475 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 NAALADL1Q9UQQ1 740 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 HBS1LQ9Y450 684 aaKnown RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 CPQQ9Y646 472 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 URB1O60287 2271 aaKnown RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 SPTA1P02549 2419 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 C5orf60A6NFR6 353 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 ZSCAN5CA6NGD5 496 aaPredicted RBP7.03□□□□□ -1.28
VPS13A-201ENST00000355766 GOLGA6L10A6NI86 522 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 A6NNZ2 444 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 ERI2A8K979 691 aaKnown RBP7.03□□□□□ -1.28
VPS13A-201ENST00000355766 KCNU1A8MYU2 1149 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 GOLGA8KD6RF30 607 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 EEF2KO00418 725 aaKnown RBP7.03□□□□□ -1.28
VPS13A-201ENST00000355766 DNALI1O14645 258 aaPredicted RBP7.03□□□□□ -1.28
VPS13A-201ENST00000355766 TP73O15350 636 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 BCAT2O15382 392 aaPredicted RBP7.03□□□□□ -1.28
VPS13A-201ENST00000355766 TULP3O75386 442 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 GCATO75600 419 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 SPAG6O75602 509 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 TCEA3O75764 348 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 OAS1P00973 400 aaKnown RBP7.03□□□□□ -1.28
VPS13A-201ENST00000355766 KRT14P02533 472 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 APOEP02649 317 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 MPOP05164 745 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 CD48P09326 243 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 VAV1P15498 845 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 CCT8P50990 548 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 AFF3P51826 1226 aaKnown RBP7.03□□□□□ -1.28
VPS13A-201ENST00000355766 TPI1P60174 286 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 CXADRP78310 365 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 COG7P83436 770 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 RHDQ02161 417 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 GAD2Q05329 585 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 ADCY2Q08462 1091 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 RTP5Q14D33 572 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 PRKD1Q15139 912 aaPredicted RBP7.03□□□□□ -1.28
VPS13A-201ENST00000355766 RASA2Q15283 850 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 TUBB8Q3ZCM7 444 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 CCDC157Q569K6 752 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 PPP6R3Q5H9R7 873 aaPredicted RBP7.03□□□□□ -1.28
VPS13A-201ENST00000355766 RNASEH2BQ5TBB1 312 aaKnown RBP7.03□□□□□ -1.28
VPS13A-201ENST00000355766 MANEALQ5VSG8 457 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 SYPL2Q5VXT5 272 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 KAZNQ674X7 775 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 NCBP2-AS2Q69YL0 99 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 KIAA1324Q6UXG2 1013 aaKnown RBP7.03□□□□□ -1.28
VPS13A-201ENST00000355766 SCD5Q86SK9 330 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 SCN4BQ8IWT1 228 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 PPIL6Q8IXY8 311 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 CHPFQ8IZ52 775 aa7.03□□□□□ -1.28
VPS13A-201ENST00000355766 CCDC185Q8N715 623 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms