RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 HS3ST5Q8IZT8 346 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 ZNF555Q8NEP9 628 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 LRRC20Q8TCA0 184 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 RXFP2Q8WXD0 754 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 AURKBQ96GD4 344 aaPredicted RBP13.2□□□□□ -0.3
IFT88-202ENST00000351808 MCMBPQ9BTE3 642 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 ENTPD7Q9NQZ7 604 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 NDFIP2Q9NV92 336 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 DTLQ9NZJ0 730 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 AASSQ9UDR5 926 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 COL5A2P05997 1499 aaPredicted RBP13.19□□□□□ -0.3
IFT88-202ENST00000351808 MAGEB16A2A368 324 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 METTL15A6NJ78 407 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 LEUTXA8MZ59 168 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 TARM1B6A8C7 271 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 ZNF780AO75290 641 aaPredicted RBP13.19□□□□□ -0.3
IFT88-202ENST00000351808 PDGFRAP16234 1089 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 CAPN3P20807 821 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 APLP1P51693 650 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 SLAMF1Q13291 335 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 KCNAB2Q13303 367 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 ZNF460Q14592 562 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 FUT11Q495W5 492 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 CES5AQ6NT32 575 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 SMIM5Q71RC9 77 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 CEP170P1Q96L14 293 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 MBOAT4Q96T53 435 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 GON7Q9BXV9 100 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 MEAF6Q9HAF1 191 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 FBXO28Q9NVF7 368 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 POLR3BQ9NW08 1133 aaPredicted RBP13.19□□□□□ -0.3
IFT88-202ENST00000351808 PCDH10Q9P2E7 1040 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 BTBD3Q9Y2F9 522 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 RIPK3Q9Y572 518 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 PCDHGB6Q9Y5F9 930 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 DHX15O43143 795 aaKnown RBP13.19□□□□□ -0.3
IFT88-202ENST00000351808 HUS1O60921 280 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 PRLP01236 227 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 IL7P13232 177 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 ST13P50502 369 aaKnown RBP13.19□□□□□ -0.3
IFT88-202ENST00000351808 MYL6P60660 151 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 ISL1P61371 349 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 EPS8Q12929 822 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 TOP3AQ13472 1001 aaPredicted RBP13.19□□□□□ -0.3
IFT88-202ENST00000351808 UGT3A2Q3SY77 523 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 ZNF517Q6ZMY9 492 aaPredicted RBP13.19□□□□□ -0.3
IFT88-202ENST00000351808 SPNS2Q8IVW8 549 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 BRSK2Q8IWQ3 736 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 MICU2Q8IYU8 434 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 MINDY1Q8N5J2 469 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 TXNDC5Q8NBS9 432 aaKnown RBP13.19□□□□□ -0.3
IFT88-202ENST00000351808 AFG1LQ8WV93 481 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 GIMAP1Q8WWP7 306 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 NECTIN4Q96NY8 510 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 NAT9Q9BTE0 207 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 MAGEB5Q9BZ81 275 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 HAPLN2Q9GZV7 340 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 ZNF304Q9HCX3 659 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 NUP50Q9UKX7 468 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 PRR12Q9ULL5 1215 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 LOXHD1Q8IVV2 1947 aa13.19□□□□□ -0.3
IFT88-202ENST00000351808 TEX51A0A1B0GUA7 166 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 NFIBO00712 420 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 ANGPT2O15123 496 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 OGTO15294 1046 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 KPNA6O60684 536 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 PGLSO95336 258 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 PSKH1P11801 424 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 DNAJB1P25685 340 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 CLK1P49759 484 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 ZNF143P52747 638 aaPredicted RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 GPR50Q13585 617 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 USP10Q14694 798 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 MFSD10Q14728 455 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 LRRC26Q2I0M4 334 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 PARP15Q460N3 678 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 SPANXN3Q5MJ09 141 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 GLYATQ6IB77 296 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 AMIGO1Q86WK6 493 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 KIAA1958Q8N8K9 716 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 SH3KBP1Q96B97 665 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 LRRC58Q96CX6 371 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 BBS2Q9BXC9 721 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 ALG2Q9H553 416 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 CYP4F12Q9HCS2 524 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 TM9SF3Q9HD45 589 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 NGRNQ9NPE2 291 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 CHST12Q9NRB3 414 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 IARS2Q9NSE4 1012 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 VANGL2Q9ULK5 521 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 PCDHGA10Q9Y5H3 936 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 CNTNAP4Q9C0A0 1308 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 A8MUA0 341 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 PDPK1O15530 556 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 FADS2O95864 444 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 ALDOCP09972 364 aaKnown RBP13.18□□□□□ -0.3
IFT88-202ENST00000351808 CD36P16671 472 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 GPX3P22352 226 aa13.18□□□□□ -0.3
IFT88-202ENST00000351808 CFL1P23528 166 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms