RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 C19orf43Q9BQ61 176 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 LRRC40Q9H9A6 602 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 EVA1BQ9NVM1 165 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 MOSPD1Q9UJG1 213 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 TMPRSS11EQ9UL52 423 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 PYCARDQ9ULZ3 195 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 DOLKQ9UPQ8 538 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 PSMD3O43242 534 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 KIF5CO60282 957 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 DNAJC6O75061 913 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 PPFIA2O75334 1257 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 GP1BAP07359 652 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 SPAM1P38567 509 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 TCEA2Q15560 299 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 TAF1AQ15573 450 aaPredicted RBP21.91■■□□□ 1.1
SNX3-202ENST00000349379 LONRF2Q1L5Z9 754 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 PYCR3Q53H96 274 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 OGFOD3Q6PK18 319 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 PDCD7Q8N8D1 485 aaKnown RBP21.91■■□□□ 1.1
SNX3-202ENST00000349379 ARL10Q8N8L6 244 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 PRELID2Q8N945 189 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 BRSK1Q8TDC3 778 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 SCG3Q8WXD2 468 aaKnown RBP21.91■■□□□ 1.1
SNX3-202ENST00000349379 GLYATL1Q969I3 302 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 OR2M4Q96R27 311 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 IL26Q9NPH9 171 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.91■■□□□ 1.11e-8■□□□□ 9.4
SNX3-202ENST00000349379 MSRB2Q9Y3D2 182 aa21.91■■□□□ 1.1
SNX3-202ENST00000349379 PCYT1BQ9Y5K3 369 aaPredicted RBP21.91■■□□□ 1.1
SNX3-202ENST00000349379 ERI2A8K979 691 aaKnown RBP21.9■■□□□ 1.1
SNX3-202ENST00000349379 GAPDHSO14556 408 aaPredicted RBP21.9■■□□□ 1.1
SNX3-202ENST00000349379 IFNB1P01574 187 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 ETS1P14921 441 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 MSNP26038 577 aaKnown RBP21.9■■□□□ 1.1
SNX3-202ENST00000349379 FDFT1P37268 417 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 ADCY8P40145 1251 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 CCDC173Q0VFZ6 552 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 NR0B2Q15466 257 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 CCDC157Q569K6 752 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 TAF8Q7Z7C8 310 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 PRUNE1Q86TP1 453 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 GPR156Q8NFN8 814 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 GLMNQ92990 594 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 LRRC45Q96CN5 670 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 TMEM121BQ9BXQ6 578 aaPredicted RBP21.9■■□□□ 1.1
SNX3-202ENST00000349379 GSDMCQ9BYG8 508 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 RMI1Q9H9A7 625 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 ETNK1Q9HBU6 452 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 HOMER3Q9NSC5 361 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 GPR34Q9UPC5 381 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 ARL5AQ9Y689 179 aa21.9■■□□□ 1.1
SNX3-202ENST00000349379 SUN1O94901 812 aa21.89■■□□□ 1.09
SNX3-202ENST00000349379 LPOP22079 712 aaPredicted RBP21.89■■□□□ 1.09
SNX3-202ENST00000349379 E2F1Q01094 437 aa21.89■■□□□ 1.09
SNX3-202ENST00000349379 SEMA5AQ13591 1074 aa21.89■■□□□ 1.09
SNX3-202ENST00000349379 ATP13A5Q4VNC0 1218 aa21.89■■□□□ 1.09
SNX3-202ENST00000349379 GUSBP11Q6P575 273 aa21.89■■□□□ 1.09
SNX3-202ENST00000349379 GALNT15Q8N3T1 639 aa21.89■■□□□ 1.09
SNX3-202ENST00000349379 KYQ8NBH2 561 aa21.89■■□□□ 1.09
SNX3-202ENST00000349379 OSBPL9Q96SU4 736 aa21.89■■□□□ 1.09
SNX3-202ENST00000349379 TRIM39Q9HCM9 518 aa21.89■■□□□ 1.09
SNX3-202ENST00000349379 PAK5Q9P286 719 aa21.89■■□□□ 1.09
SNX3-202ENST00000349379 PKP3Q9Y446 797 aa21.89■■□□□ 1.09
SNX3-202ENST00000349379 C2orf81A6NN90 581 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 GPR89AB7ZAQ6 455 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 CES2O00748 559 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 STX7O15400 261 aaKnown RBP21.88■■□□□ 1.09
SNX3-202ENST00000349379 BUD23O43709 281 aaKnown RBP21.88■■□□□ 1.09
SNX3-202ENST00000349379 NUAK1O60285 661 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 NOBOXO60393 691 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 SLC25A14O95258 325 aaPredicted RBP21.88■■□□□ 1.09
SNX3-202ENST00000349379 ASMTLO95671 621 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 GPR89BP0CG08 455 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 AK4P27144 223 aaPredicted RBP21.88■■□□□ 1.09
SNX3-202ENST00000349379 ACTN2P35609 894 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 RPIAP49247 311 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 ZNF140P52738 457 aaPredicted RBP21.88■■□□□ 1.09
SNX3-202ENST00000349379 CTBSQ01459 385 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 ILF3Q12906 894 aaKnown RBP eCLIP21.88■■□□□ 1.09
SNX3-202ENST00000349379 PTPRCAPQ14761 206 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 CCNI2Q6ZMN8 369 aaPredicted RBP21.88■■□□□ 1.09
SNX3-202ENST00000349379 MARK2Q7KZI7 788 aaKnown RBP21.88■■□□□ 1.09
SNX3-202ENST00000349379 TMPRSS12Q86WS5 348 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 C17orf82Q86X59 251 aaPredicted RBP21.88■■□□□ 1.09
SNX3-202ENST00000349379 GALNT13Q8IUC8 556 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 PHYKPLQ8IUZ5 450 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 TAB3Q8N5C8 712 aaPredicted RBP21.88■■□□□ 1.09
SNX3-202ENST00000349379 CCDC89Q8N998 374 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 FAM46DQ8NEK8 389 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 IFI44Q8TCB0 444 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 COG1Q8WTW3 980 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 NAT6Q93015 286 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 MS4A14Q96JA4 679 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 SUDS3Q9H7L9 328 aaPredicted RBP21.88■■□□□ 1.09
SNX3-202ENST00000349379 ATXN10Q9UBB4 475 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 SNX12Q9UMY4 172 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 UNC13CQ8NB66 2214 aa21.88■■□□□ 1.09
SNX3-202ENST00000349379 GLYATL1P3A0A0U1RQE8 302 aa21.87■■□□□ 1.09
SNX3-202ENST00000349379 CHUKO15111 745 aa21.87■■□□□ 1.09
SNX3-202ENST00000349379 LDB2O43679 373 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms