RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 MAGED1Q9Y5V3 778 aaPredicted RBP18.59■□□□□ 0.57
SCARF1-202ENST00000348987 DOCK3Q8IZD9 2030 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 MAGEB16A2A368 324 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 ANGPT2O15123 496 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 HTR1AP08908 422 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 BDNFP23560 247 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 DNAJB13P59910 316 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 CSHL1Q14406 222 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 CBX2Q14781 532 aaPredicted RBP18.58■□□□□ 0.57
SCARF1-202ENST00000348987 SMUG1Q53HV7 270 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 LIMS2Q7Z4I7 341 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 MINDY1Q8N5J2 469 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 DNAJB14Q8TBM8 379 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 HDAC11Q96DB2 347 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 ENPP5Q9UJA9 477 aa18.58■□□□□ 0.57
SCARF1-202ENST00000348987 UBFD1O14562 309 aaKnown RBP18.58■□□□□ 0.56
SCARF1-202ENST00000348987 HOXD8P13378 290 aaPredicted RBP18.58■□□□□ 0.56
SCARF1-202ENST00000348987 APLP1P51693 650 aa18.58■□□□□ 0.56
SCARF1-202ENST00000348987 TAS2R39P59534 338 aa18.58■□□□□ 0.56
SCARF1-202ENST00000348987 SNX17Q15036 470 aa18.58■□□□□ 0.56
SCARF1-202ENST00000348987 DPY19L1Q2PZI1 675 aa18.58■□□□□ 0.56
SCARF1-202ENST00000348987 KCTD11Q693B1 232 aa18.58■□□□□ 0.56
SCARF1-202ENST00000348987 MMAAQ8IVH4 418 aaKnown RBP18.58■□□□□ 0.56
SCARF1-202ENST00000348987 MFSD4AQ8N468 514 aa18.58■□□□□ 0.56
SCARF1-202ENST00000348987 S100ZQ8WXG8 99 aa18.58■□□□□ 0.56
SCARF1-202ENST00000348987 VMP1Q96GC9 406 aa18.58■□□□□ 0.56
SCARF1-202ENST00000348987 ZNF560Q96MR9 790 aa18.58■□□□□ 0.56
SCARF1-202ENST00000348987 TCRBV5S2A0A599 114 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 A8MT66 165 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 TREHO43280 583 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 INMTO95050 263 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 CA8P35219 290 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 LSM3P62310 102 aaKnown RBP18.57■□□□□ 0.56
SCARF1-202ENST00000348987 CCNA1P78396 465 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 RABL3Q5HYI8 236 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 SCML4Q8N228 414 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 ATP6V0D2Q8N8Y2 350 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 GOLM1Q8NBJ4 401 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 LRRC58Q96CX6 371 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 ELMO2Q96JJ3 720 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 MED10Q9BTT4 135 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 NOL6Q9H6R4 1146 aaKnown RBP18.57■□□□□ 0.56
SCARF1-202ENST00000348987 PARVBQ9HBI1 364 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 ANAPC2Q9UJX6 822 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 MAN1A2O60476 641 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 CHEK2O96017 543 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 CYP2B6P20813 491 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 ALDH4A1P30038 563 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 SLC13A2Q13183 592 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 SKIV2LQ15477 1246 aaKnown RBP18.57■□□□□ 0.56
SCARF1-202ENST00000348987 RNF19BQ6ZMZ0 732 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 UTS2BQ765I0 119 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 THAP5Q7Z6K1 395 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 TBC1D21Q8IYX1 336 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 EDEM1Q92611 657 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 HTRA1Q92743 480 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 HOXD1Q9GZZ0 328 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 TP63Q9H3D4 680 aaPredicted RBP18.57■□□□□ 0.56
SCARF1-202ENST00000348987 CRTAC1Q9NQ79 661 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.57■□□□□ 0.56
SCARF1-202ENST00000348987 ZNF639Q9UID6 485 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 IPPQ9Y573 584 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 PCDHGA11Q9Y5H2 935 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 PTGDR2Q9Y5Y4 395 aa18.57■□□□□ 0.56
SCARF1-202ENST00000348987 NRCAMQ92823 1304 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 BBIP1A8MTZ0 92 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 PTGESO14684 152 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 IPO13O94829 963 aaKnown RBP18.56■□□□□ 0.56
SCARF1-202ENST00000348987 KRT75O95678 551 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 USP17L7P0C7H9 530 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 HOXD11P31277 338 aaPredicted RBP18.56■□□□□ 0.56
SCARF1-202ENST00000348987 NPY2RP49146 381 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 GEN1Q17RS7 908 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 FUT11Q495W5 492 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 PRMT9Q6P2P2 845 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 RNF145Q96MT1 663 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 SLC2A13Q96QE2 648 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 CEP44Q9C0F1 390 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 PIF1Q9H611 641 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 AKTIPQ9H8T0 292 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 CPA4Q9UI42 421 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 STAP1Q9ULZ2 295 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 TMA7Q9Y2S6 64 aaKnown RBP18.56■□□□□ 0.56
SCARF1-202ENST00000348987 NDUFAF1Q9Y375 327 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 TCF3P15923 654 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 NFKB1P19838 968 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 SERPINB1P30740 379 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 BMPR1AP36894 532 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 GSK3BP49841 420 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 ARPC4P59998 168 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 MEP1AQ16819 746 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 AKAP14Q86UN6 197 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 NDNFQ8TB73 568 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 CELF6Q96J87 481 aaKnown RBP18.56■□□□□ 0.56
SCARF1-202ENST00000348987 TINF2Q9BSI4 451 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 CHID1Q9BWS9 393 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 ALG2Q9H553 416 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 NSMCE4AQ9NXX6 385 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 USP22Q9UPT9 525 aa18.56■□□□□ 0.56
SCARF1-202ENST00000348987 PCDHGA8Q9Y5G5 932 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms