RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 PGM2Q96G03 612 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 CCNL2Q96S94 520 aaPredicted RBP9.74□□□□□ -0.85
MRPL55-204ENST00000348259 C1QTNF2Q9BXJ5 285 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 SLC17A9Q9BYT1 436 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 TRIM4Q9C037 500 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 CDC42EP4Q9H3Q1 356 aaKnown RBP9.74□□□□□ -0.85
MRPL55-204ENST00000348259 PPCSQ9HAB8 311 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 TMBIM4Q9HC24 238 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 EIF2B3Q9NR50 452 aaKnown RBP9.74□□□□□ -0.85
MRPL55-204ENST00000348259 DNAJC28Q9NX36 388 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 NCKIPSDQ9NZQ3 722 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 VPS51Q9UID3 782 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 MFHAS1Q9Y4C4 1052 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 FADS3Q9Y5Q0 445 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 SDK2Q58EX2 2172 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 ITPR2Q14571 2701 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 MYO9AB2RTY4 2548 aa9.74□□□□□ -0.85
MRPL55-204ENST00000348259 GOLGA6L10A6NI86 522 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 HMGB1P1B2RPK0 211 aaPredicted RBP9.73□□□□□ -0.85
MRPL55-204ENST00000348259 KPNA3O00505 521 aaPredicted RBP9.73□□□□□ -0.85
MRPL55-204ENST00000348259 CLDN11O75508 207 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 CNTN5O94779 1100 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 CD160O95971 181 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 PRNPP04156 253 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 ITGB2P05107 769 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 MYZAPP0CAP1 466 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 MLNP12872 115 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 RABIFP47224 123 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 NDST2P52849 883 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 CDH4P55283 916 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 WASHC5Q12768 1159 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 NFATC3Q12968 1075 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 RASA2Q15283 850 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 KCTD19Q17RG1 926 aaPredicted RBP9.73□□□□□ -0.85
MRPL55-204ENST00000348259 ALFQ53S48 1182 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 CEP85LQ5SZL2 805 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 KIAA1161Q6NSJ0 714 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 C22orf39Q6P5X5 142 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 DPY19L3Q6ZPD9 716 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 ARHGEF18Q6ZSZ5 1173 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 PTAR1Q7Z6K3 402 aaPredicted RBP9.73□□□□□ -0.85
MRPL55-204ENST00000348259 B3GNT8Q7Z7M8 397 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 CCDC25Q86WR0 208 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 ARHGAP12Q8IWW6 846 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 KLHDC8BQ8IXV7 354 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 ARL14Q8N4G2 192 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 NPWQ8N729 165 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 RTL3Q8N8U3 475 aaKnown RBP9.73□□□□□ -0.85
MRPL55-204ENST00000348259 DCAF4L2Q8NA75 395 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 DENND6BQ8NEG7 585 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 WDR48Q8TAF3 677 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 CCDC77Q9BR77 488 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 ZYG11BQ9C0D3 744 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 SIK2Q9H0K1 926 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 ABCG4Q9H172 646 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 TCEAL2Q9H3H9 227 aaPredicted RBP9.73□□□□□ -0.85
MRPL55-204ENST00000348259 ETNK1Q9HBU6 452 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 RAB6BQ9NRW1 208 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 EVA1BQ9NVM1 165 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 TMEM248Q9NWD8 314 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 NINJ2Q9NZG7 142 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 FETUBQ9UGM5 382 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 RABGEF1Q9UJ41 708 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 VANGL2Q9ULK5 521 aa9.73□□□□□ -0.85
MRPL55-204ENST00000348259 ERI2A8K979 691 aaKnown RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 LMO7DNF2Z398 122 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 SPAG6O75602 509 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 LEFTY1O75610 366 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 TNFSF15O95150 251 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 PAK4O96013 591 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 ADRB3P13945 408 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 WT1P19544 449 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 ITGB7P26010 798 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 SLC5A2P31639 672 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 MAGEA3P43357 314 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 MAPKAPK2P49137 400 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 RPS21P63220 83 aaKnown RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 IFI35P80217 286 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 BASP1P80723 227 aaKnown RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 SARNPP82979 210 aaKnown RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 NFKB2Q00653 900 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 IFFO1Q0D2I5 559 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 AP1B1Q10567 949 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 NR0B2Q15466 257 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 KYNUQ16719 465 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 DEFB133Q30KQ1 61 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 ACCSLQ4AC99 568 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 TEX44Q53QW1 395 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 TNFAIP8L3Q5GJ75 292 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 C6orf132Q5T0Z8 1188 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 ANKRD22Q5VYY1 191 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 TIGD7Q6NT04 549 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 RWDD4Q6NW29 188 aaKnown RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 CRTC1Q6UUV9 634 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 PARS2Q7L3T8 475 aaKnown RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 PRICKLE2Q7Z3G6 844 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 CCDC13Q8IYE1 715 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 RBFAQ8N0V3 343 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 CCNYQ8ND76 341 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 CCDC110Q8TBZ0 833 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms