RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 WDR60Q8WVS4 1066 aa23.01■■□□□ 1.27
NPAS3-201ENST00000346562 SEC14L3Q9UDX4 400 aa23.01■■□□□ 1.27
NPAS3-201ENST00000346562 C5orf60A6NFR6 353 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 E9PAM4 449 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 TRAFD1O14545 582 aaPredicted RBP23■■□□□ 1.27
NPAS3-201ENST00000346562 UNC5CO95185 931 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 UGT2B4P06133 528 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 SAPCD2Q86UD0 394 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 TAPBPLQ9BX59 468 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 LRTM1Q9HBL6 345 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 MARK1Q9P0L2 795 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 GJB1P08034 283 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 FNBP1LQ5T0N5 605 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 ZNF697Q5TEC3 545 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 LMLNQ96KR4 655 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 EPHA3P29320 983 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 BMT2Q1RMZ1 405 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 FAM110CQ1W6H9 321 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 EEF1DP3Q658K8 133 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 TNS4Q8IZW8 715 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 PKMP14618 531 aaKnown RBP23■■□□□ 1.27
NPAS3-201ENST00000346562 DCTN2Q13561 401 aaKnown RBP23■■□□□ 1.27
NPAS3-201ENST00000346562 UGCGQ16739 394 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 TTMPQ5BVD1 217 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 RIT1Q92963 219 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 RNPEPL1Q9HAU8 725 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 RHOQP17081 205 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 CDH4P55283 916 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 RNASEH2BQ5TBB1 312 aaKnown RBP23■■□□□ 1.27
NPAS3-201ENST00000346562 LRRC55Q6ZSA7 311 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 KBTBD2Q8IY47 623 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 GJD3Q8N144 294 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 SLAIN1Q8ND83 568 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 OR2T12Q8NG77 320 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 TRPM4Q8TD43 1214 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 FCRL4Q96PJ5 515 aa23■■□□□ 1.27
NPAS3-201ENST00000346562 COL5A2P05997 1499 aaPredicted RBP22.99■■□□□ 1.27
NPAS3-201ENST00000346562 SNX3O60493 162 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 ANPEPP15144 967 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 CYP3A5P20815 502 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 GNPDA1P46926 289 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 ILF3Q12906 894 aaKnown RBP eCLIP22.99■■□□□ 1.27
NPAS3-201ENST00000346562 RIPK1Q13546 671 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 TSEN15Q8WW01 171 aaKnown RBP22.99■■□□□ 1.27
NPAS3-201ENST00000346562 MNDAP41218 407 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 POMZP3Q6PJE2 187 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 DNAJC19Q96DA6 116 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 RTKNQ9BST9 563 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 CDH3P22223 829 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 RPP38P78345 283 aaKnown RBP22.99■■□□□ 1.27
NPAS3-201ENST00000346562 IL31RAQ8NI17 732 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 RNF31Q96EP0 1072 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 PLEKHG4BQ96PX9 1271 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 EVLQ9UI08 416 aaPredicted RBP22.99■■□□□ 1.27
NPAS3-201ENST00000346562 DHRS7Q9Y394 339 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 TGDSO95455 350 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 SAGP10523 405 aaPredicted RBP22.99■■□□□ 1.27
NPAS3-201ENST00000346562 NR1H2P55055 460 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 INTS6LQ5JSJ4 861 aaKnown RBP22.99■■□□□ 1.27
NPAS3-201ENST00000346562 TCEAL6Q6IPX3 200 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 ZCCHC12Q6PEW1 402 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 RHBDF2Q6PJF5 856 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 LRRN4Q8WUT4 740 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 GPR20Q99678 358 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 ADGRE2Q9UHX3 823 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 IKZF2Q9UKS7 526 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 PXDNQ92626 1479 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 CDK14O94921 469 aa22.99■■□□□ 1.27
NPAS3-201ENST00000346562 RPL7AP62424 266 aaKnown RBP22.99■■□□□ 1.27
NPAS3-201ENST00000346562 ILDR1Q86SU0 546 aaPredicted RBP22.99■■□□□ 1.27
NPAS3-201ENST00000346562 ZNF483Q8TF39 744 aaPredicted RBP22.99■■□□□ 1.27
NPAS3-201ENST00000346562 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.98■■□□□ 1.27
NPAS3-201ENST00000346562 FPGTO14772 594 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 TIPRLO75663 272 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 COL6A2P12110 1019 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 IFNA6P05013 189 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 TPSB2P20231 275 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 RAB25P57735 213 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 TPSAB1Q15661 275 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 OR4K2Q8NGD2 314 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 STYXQ8WUJ0 223 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 PNLIPRP1P54315 467 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 TAS2R40P59535 323 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 OLR1P78380 273 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 SEMA5AQ13591 1074 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 MSANTD2Q6P1R3 559 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 CERS6Q6ZMG9 384 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 MSL3Q8N5Y2 521 aaKnown RBP22.98■■□□□ 1.27
NPAS3-201ENST00000346562 TCRBV9S1A1TA0A576 114 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 SYN3O14994 580 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 CLDN9O95484 217 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 VARSP26640 1264 aaKnown RBP22.98■■□□□ 1.27
NPAS3-201ENST00000346562 LSM3P62310 102 aaKnown RBP22.98■■□□□ 1.27
NPAS3-201ENST00000346562 ARF5P84085 180 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 EML3Q32P44 896 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 POC5Q8NA72 575 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 GLIS3Q8NEA6 775 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 ABCB10Q9NRK6 738 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 HEBP2Q9Y5Z4 205 aa22.98■■□□□ 1.27
NPAS3-201ENST00000346562 A0A0J9YYE9 177 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms