RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 THAP1Q9NVV9 213 aa21.34■■□□□ 1.01
TSPAN3-202ENST00000346495 KLHL14Q9P2G3 628 aa21.34■■□□□ 1.01
TSPAN3-202ENST00000346495 XPR1Q9UBH6 696 aa21.34■■□□□ 1.01
TSPAN3-202ENST00000346495 SUN2Q9UH99 717 aa21.34■■□□□ 1.01
TSPAN3-202ENST00000346495 CRLS1Q9UJA2 301 aa21.34■■□□□ 1.01
TSPAN3-202ENST00000346495 LAMA3Q16787 3333 aa21.34■■□□□ 1.01
TSPAN3-202ENST00000346495 TARM1B6A8C7 271 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 KPNA3O00505 521 aaPredicted RBP21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 PRMT5O14744 637 aaPredicted RBP21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 OR1I1O60431 355 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 VPS26AO75436 327 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 ZNF7P17097 686 aaPredicted RBP21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 OCRLQ01968 901 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 TECRLQ5HYJ1 363 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 ERAP2Q6P179 960 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 TMEM207Q6UWW9 146 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 ZCCHC23Q6ZST2 131 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 SUGP1Q8IWZ8 645 aaKnown RBP21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 RBFAQ8N0V3 343 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 MICALL1Q8N3F8 863 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 ANKRD49Q8WVL7 239 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 RAD18Q9NS91 495 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 PPM1HQ9ULR3 514 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 CDH23Q9H251 3354 aa21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 TCF20Q9UGU0 1960 aaKnown RBP21.33■■□□□ 1.01
TSPAN3-202ENST00000346495 TICRRQ7Z2Z1 1910 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 GOLGA8CPA6NN73 597 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 GPR39O43194 453 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 TRIM13O60858 407 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 SBK3P0C264 359 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 ZNF37AP17032 561 aaPredicted RBP21.33■■□□□ 1
TSPAN3-202ENST00000346495 RPS3P23396 243 aaKnown RBP eCLIP21.33■■□□□ 13e-7■■■□□ 18.1
TSPAN3-202ENST00000346495 ITGB7P26010 798 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 ACRV1P26436 265 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 IL12RB1P42701 662 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 ITGA9Q13797 1035 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 CTSL3PQ5NE16 218 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 CES4AQ5XG92 561 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 C6orf89Q6UWU4 347 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 PARS2Q7L3T8 475 aaKnown RBP21.33■■□□□ 1
TSPAN3-202ENST00000346495 DSG4Q86SJ6 1040 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 PIP4K2CQ8TBX8 421 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 TRIM55Q9BYV6 548 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 OXSMQ9NWU1 459 aa21.33■■□□□ 1
TSPAN3-202ENST00000346495 OAS3Q9Y6K5 1087 aaKnown RBP21.33■■□□□ 1
TSPAN3-202ENST00000346495 AGAP14A8MT82 685 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 ASPHQ12797 758 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 UGT3A1Q6NUS8 523 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 CRLF3Q8IUI8 442 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 OR6Y1Q8NGX8 325 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 KCNJ9Q92806 393 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 ULK4Q96C45 1275 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 PPP1R16AQ96I34 528 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 CLPBQ9H078 707 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 SARDHQ9UL12 918 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 FAM50BQ9Y247 325 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 MED16Q9Y2X0 877 aa21.32■■□□□ 1
TSPAN3-202ENST00000346495 HNRNPLP14866 589 aaKnown RBP eCLIP21.31■■□□□ 1
TSPAN3-202ENST00000346495 UGT1A6P19224 532 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 UGT1A1P22309 533 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 UGT1A4P22310 534 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 UGT1A3P35503 534 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 UGT1A5P35504 534 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 SKIV2L2P42285 1042 aaKnown RBP21.31■■□□□ 1
TSPAN3-202ENST00000346495 SLC1A6P48664 564 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 RGS19P49795 217 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 HNRNPH2P55795 449 aaKnown RBP21.31■■□□□ 1
TSPAN3-202ENST00000346495 DCDC1P59894 354 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 OVGP1Q12889 678 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 RALGDSQ12967 914 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 POM121L1PQ3SYA9 428 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 LIPMQ5VYY2 423 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 EGFLAMQ63HQ2 1017 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 NXPE1Q8N323 547 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 FAM129BQ96TA1 746 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 GPR21Q99679 349 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 UNKQ9C0B0 810 aaKnown RBP21.31■■□□□ 1
TSPAN3-202ENST00000346495 NPHS2Q9NP85 383 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 TRMT6Q9UJA5 497 aaKnown RBP21.31■■□□□ 1
TSPAN3-202ENST00000346495 GNPTGQ9UJJ9 305 aa21.31■■□□□ 1
TSPAN3-202ENST00000346495 RGSL1A5PLK6 1076 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 TMEM114B3SHH9 223 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 E5RI56 91 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 H3BMM5 538 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 NPC1O15118 1278 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 NIPSNAP2O75323 286 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 EPHX1P07099 455 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 MMP12P39900 470 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 TNFRSF4P43489 277 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 IFT88Q13099 833 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 SETMARQ53H47 684 aaPredicted RBP21.3■■□□□ 1
TSPAN3-202ENST00000346495 NKAPQ8N5F7 415 aaKnown RBP21.3■■□□□ 1
TSPAN3-202ENST00000346495 DTX3LQ8TDB6 740 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 CCDC126Q96EE4 140 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 THOC1Q96FV9 657 aaKnown RBP21.3■■□□□ 1
TSPAN3-202ENST00000346495 GAS2L1Q99501 681 aaPredicted RBP21.3■■□□□ 1
TSPAN3-202ENST00000346495 P2RY13Q9BPV8 354 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 CDH19Q9H159 772 aa21.3■■□□□ 1
TSPAN3-202ENST00000346495 NFKBIL1Q9UBC1 381 aaPredicted RBP21.3■■□□□ 1
TSPAN3-202ENST00000346495 HCN2Q9UL51 889 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms