RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CDK5RAP1Q96SZ6 601 aaKnown RBP14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 POPDC3Q9HBV1 291 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 HMX1Q9NP08 348 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 SPATS2LQ9NUQ6 558 aaKnown RBP14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 COMMD8Q9NX08 183 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 AP4S1Q9Y587 144 aa14.81□□□□□ -0.04
VIPAS39-202ENST00000343765 MYOCOSA0A1B0GUC4 107 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 TMCC1O94876 653 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 PGM3O95394 542 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 C1RP00736 705 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 LPOP22079 712 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 HOXD10P28358 340 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 ARF5P84085 180 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 CDKL1Q00532 357 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 TRAF2Q12933 501 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 LCP2Q13094 533 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 BTG3Q14201 252 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 RPS6KA2Q15349 733 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 KANK2Q63ZY3 851 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 CARNMT1Q8N4J0 409 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 OR6K2Q8NGY2 324 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 C2orf15Q8WU43 125 aaKnown RBP14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 FUBP1Q96AE4 644 aaKnown RBP14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 EME1Q96AY2 570 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 BIRC8Q96P09 236 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 TRAPPC9Q96Q05 1148 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 DERL2Q9GZP9 239 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 UBAP1Q9NZ09 502 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 TRPM5Q9NZQ8 1165 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 APPL1Q9UKG1 709 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 A0A1B0GVM2 712 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 ILVBLA1L0T0 632 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 ZNF839A8K0R7 811 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 STX7O15400 261 aaKnown RBP14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 BMP1P13497 986 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 CAPN3P20807 821 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 MZF1P28698 734 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 SOX11P35716 441 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 ARL1P40616 181 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 RBBP7Q16576 425 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 ATXN7L2Q5T6C5 722 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 UGT3A1Q6NUS8 523 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 MIER2Q8N344 545 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 EEF1AKMT1Q8WVE0 214 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 VN1R3Q9BXE9 311 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 MRGBPQ9NV56 204 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 SNX13Q9Y5W8 968 aa14.8□□□□□ -0.04
VIPAS39-202ENST00000343765 LCHNA4D1U4 455 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 HMGA1P17096 107 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 CTPS1P17812 591 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 TUFMP49411 452 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 DIO3P55073 304 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 C6orf10Q5SRN2 563 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 ANKS6Q68DC2 871 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 CXorf57Q6NSI4 855 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 AMIGO2Q86SJ2 522 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 CPNE9Q8IYJ1 553 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 TMEM102Q8N9M5 508 aaPredicted RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 FAM110BQ8TC76 370 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 LINGO1Q96FE5 620 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 MRPL9Q9BYD2 267 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 TMEM181Q9P2C4 612 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 TRMT6Q9UJA5 497 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 SARDHQ9UL12 918 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 FCF1Q9Y324 198 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 RANBP2P49792 3224 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 ANKRD66B4E2M5 251 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 H0Y626 953 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 VPS26AO75436 327 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 YBX1P67809 324 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 USP41Q3LFD5 358 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 CTSL3PQ5NE16 218 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 SAMD4BQ5PRF9 694 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 ADGRF1Q5T601 910 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 SLC8B1Q6J4K2 584 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 FAM126BQ8IXS8 530 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 ADCY4Q8NFM4 1077 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 ASB2Q96Q27 587 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 ACOX2Q99424 681 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 Q9H521 79 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 MRPL40Q9NQ50 206 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 MTRRQ9UBK8 725 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 RIMKLBQ9ULI2 386 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 ASB1Q9Y576 335 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 PCDHB9Q9Y5E1 797 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 E5RI56 91 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 ANGPT2O15123 496 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 TBL1XO60907 577 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 F11P03951 625 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 PYGLP06737 847 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 FGF4P08620 206 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 PKMP14618 531 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 LBPP18428 481 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 GRIA3P42263 894 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 MTA1Q13330 715 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 LIN52Q52LA3 116 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 TICAM1Q8IUC6 712 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 PHYKPLQ8IUZ5 450 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 HERC6Q8IVU3 1022 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms