RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PAQR3Q6TCH7 311 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 LRRC74BQ6ZQY2 392 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 OR2AP1Q8NGE2 309 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 NRG4Q8WWG1 115 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 DNAJC9Q8WXX5 260 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 LRCH3Q96II8 777 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 LMLNQ96KR4 655 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 BIRC8Q96P09 236 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 OSBPL1AQ9BXW6 950 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 NMRK1Q9NWW6 199 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 VTI1BQ9UEU0 232 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 MED16Q9Y2X0 877 aa18.51■□□□□ 0.55
HOXA9-201ENST00000343483 SLCO1B7G3V0H7 640 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 HTRA2O43464 458 aaPredicted RBP18.5■□□□□ 0.55
HOXA9-201ENST00000343483 XYLBO75191 536 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 COX4I1P13073 169 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 SERPINA4P29622 427 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 CSNK1DP48730 415 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 RPL26P61254 145 aaKnown RBP18.5■□□□□ 0.55
HOXA9-201ENST00000343483 KLF10Q13118 480 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 TRIM68Q6AZZ1 485 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 GRASPQ7Z6J2 395 aaPredicted RBP18.5■□□□□ 0.55
HOXA9-201ENST00000343483 GPR21Q99679 349 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 ZFYVE1Q9HBF4 777 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 SYTL2Q9HCH5 934 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 SLC30A1Q9Y6M5 507 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 WASF2Q9Y6W5 498 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 ANKRD36A6QL64 1941 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 A0A0J9YYE9 177 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 CLASP2O75122 1294 aaKnown RBP18.5■□□□□ 0.55
HOXA9-201ENST00000343483 SOCS5O75159 536 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 SMIM24O75264 130 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 TRBC1P01850 177 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 JUNP05412 331 aaKnown RBP18.5■□□□□ 0.55
HOXA9-201ENST00000343483 ERFP50548 548 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 XIAPP98170 497 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 CUL3Q13618 768 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 OR4D1Q15615 310 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 ASTLQ6HA08 431 aaPredicted RBP18.5■□□□□ 0.55
HOXA9-201ENST00000343483 FAM151BQ6UXP7 276 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 RTL10Q7L3V2 364 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 KDM1BQ8NB78 822 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 ING5Q8WYH8 240 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 LINC00597Q9H2U6 94 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 ANGPTL2Q9UKU9 493 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 FIS1Q9Y3D6 152 aa18.5■□□□□ 0.55
HOXA9-201ENST00000343483 COL6A3P12111 3177 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 A8MX80 341 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 NIPSNAP2O75323 286 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 SNUPNO95149 360 aaKnown RBP18.49■□□□□ 0.55
HOXA9-201ENST00000343483 PENKP01210 267 aaPredicted RBP18.49■□□□□ 0.55
HOXA9-201ENST00000343483 PKMP14618 531 aaKnown RBP18.49■□□□□ 0.55
HOXA9-201ENST00000343483 ATP6V1C1P21283 382 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 SP100P23497 879 aaPredicted RBP18.49■□□□□ 0.55
HOXA9-201ENST00000343483 HOXA9P31269 272 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 HNF1BP35680 557 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 SNRPD1P62314 119 aaKnown RBP18.49■□□□□ 0.55
HOXA9-201ENST00000343483 CACNG1Q06432 222 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 RAD51Q06609 339 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 SETMARQ53H47 684 aaPredicted RBP18.49■□□□□ 0.55
HOXA9-201ENST00000343483 FRMD7Q6ZUT3 714 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 ACAD11Q709F0 780 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 MYLK4Q86YV6 388 aaPredicted RBP18.49■□□□□ 0.55
HOXA9-201ENST00000343483 IRF7Q92985 503 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 ZSWIM3Q96MP5 696 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 MTIF3Q9H2K0 278 aaKnown RBP18.49■□□□□ 0.55
HOXA9-201ENST00000343483 EML4Q9HC35 981 aaKnown RBP18.49■□□□□ 0.55
HOXA9-201ENST00000343483 GALPQ9UBC7 116 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 CDYLQ9Y232 598 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 HS3ST2Q9Y278 367 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 HCFC2Q9Y5Z7 792 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 DOCK6Q96HP0 2047 aa18.49■□□□□ 0.55
HOXA9-201ENST00000343483 GBF1Q92538 1859 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 PRUNE2Q8WUY3 3088 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 VPS26AO75436 327 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 PYGLP06737 847 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 TYRP14679 529 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 ITGAXP20702 1163 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 IMPDH1P20839 514 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 LSM12Q3MHD2 195 aaKnown RBP18.48■□□□□ 0.55
HOXA9-201ENST00000343483 CMPK2Q5EBM0 449 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 CTSL3PQ5NE16 218 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 NXNQ6DKJ4 435 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 C22orf39Q6P5X5 142 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 RBM23Q86U06 439 aaKnown RBP18.48■□□□□ 0.55
HOXA9-201ENST00000343483 KIRREL3Q8IZU9 778 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 ACTRT2Q8TDY3 377 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 MYCBPQ99417 103 aaPredicted RBP18.48■□□□□ 0.55
HOXA9-201ENST00000343483 BATF3Q9NR55 127 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 SPHK2Q9NRA0 654 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 SLC25A13Q9UJS0 675 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 OAS3Q9Y6K5 1087 aaKnown RBP18.48■□□□□ 0.55
HOXA9-201ENST00000343483 C5orf67F2Z3F1 127 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 UBXN8O00124 270 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 SUPT7LO94864 414 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 CLDN7O95471 211 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 PRAMEF1O95521 474 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 HNRNPA1P09651 372 aaKnown RBP eCLIP18.48■□□□□ 0.55
HOXA9-201ENST00000343483 PABPC1P11940 636 aaKnown RBP18.48■□□□□ 0.55
HOXA9-201ENST00000343483 ACADSP16219 412 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms