RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 MAN2B1O00754 1011 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 KRT37O76014 449 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 MT-ND3P03897 115 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 ITGB6P18564 788 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 C5AR1P21730 350 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 PPP2CBP62714 309 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 PPP2CAP67775 309 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 CBX1P83916 185 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 TIAL1Q01085 375 aaKnown RBP eCLIP13.8□□□□□ -0.23e-9■■■■■ 32.4
PMS1-201ENST00000342075 FGL2Q14314 439 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 GRTP1Q5TC63 336 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 FAM46CQ5VWP2 391 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 DET1Q7L5Y6 550 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 TECPR1Q7Z6L1 1165 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 PLD6Q8N2A8 252 aaKnown RBP13.8□□□□□ -0.2
PMS1-201ENST00000342075 CBARPQ8N350 705 aaPredicted RBP13.8□□□□□ -0.2
PMS1-201ENST00000342075 RIBC1Q8N443 379 aaPredicted RBP13.8□□□□□ -0.2
PMS1-201ENST00000342075 RLN3Q8WXF3 142 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 LPGAT1Q92604 370 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 RHOJQ9H4E5 214 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 FZD3Q9NPG1 666 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 SLC17A7Q9P2U7 560 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 ZFR2Q9UPR6 939 aaKnown RBP13.8□□□□□ -0.2
PMS1-201ENST00000342075 TMEM120BA0PK00 339 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 NPC1O15118 1278 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 KRT38O76015 456 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 ADH1BP00325 375 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 RPA3P35244 121 aaPredicted RBP13.8□□□□□ -0.2
PMS1-201ENST00000342075 TAS2R39P59534 338 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 LAMB3Q13751 1172 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 PDE1CQ14123 709 aaPredicted RBP13.8□□□□□ -0.2
PMS1-201ENST00000342075 FBXO43Q4G163 708 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 MRNIPQ6NTE8 343 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 PGBD3Q8N328 593 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 ZNF398Q8TD17 642 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 MED16Q9Y2X0 877 aa13.8□□□□□ -0.2
PMS1-201ENST00000342075 NIPSNAP2O75323 286 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 SOD1P00441 154 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 SPRP35270 261 aaPredicted RBP13.79□□□□□ -0.2
PMS1-201ENST00000342075 ADPRHP54922 357 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 STARD6P59095 220 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 IRX4P78413 519 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 B4GALNT1Q00973 533 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 TYSND1Q2T9J0 566 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 CTSL3PQ5NE16 218 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 LKAAEAR1Q8TD35 194 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 COQ10AQ96MF6 247 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 BIRC8Q96P09 236 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 GPR22Q99680 433 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 SLC30A3Q99726 388 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 VPS11Q9H270 941 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 FAM83DQ9H4H8 585 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 OGFRQ9NZT2 677 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 CRLS1Q9UJA2 301 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 A0A1W2PQ67 120 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 ZNF30P17039 623 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 CACNG1Q06432 222 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 USP10Q14694 798 aaKnown RBP13.79□□□□□ -0.2
PMS1-201ENST00000342075 EOGTQ5NDL2 527 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 HENMT1Q5T8I9 393 aaKnown RBP13.79□□□□□ -0.2
PMS1-201ENST00000342075 C16orf46Q6P387 395 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 ZNF449Q6P9G9 518 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 GPR150Q8NGU9 434 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 CALML6Q8TD86 181 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 AP2M1Q96CW1 435 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 CAAP1Q9H8G2 361 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 PKD2L2Q9NZM6 624 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 INVSQ9Y283 1065 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 ABCA7Q8IZY2 2146 aa13.79□□□□□ -0.2
PMS1-201ENST00000342075 PI15O43692 258 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 LZTS3O60299 673 aaPredicted RBP13.78□□□□□ -0.2
PMS1-201ENST00000342075 PAK4O96013 591 aaPredicted RBP13.78□□□□□ -0.2
PMS1-201ENST00000342075 TYK2P29597 1187 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 TPMTP51580 245 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 GUCY1A3Q02108 690 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 PRKCQQ04759 706 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 RASA2Q15283 850 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 TMEM207Q6UWW9 146 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 TRMT11Q7Z4G4 463 aaKnown RBP13.78□□□□□ -0.2
PMS1-201ENST00000342075 SNX20Q7Z614 316 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 HCAR2Q8TDS4 363 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 CXorf40AQ8TE69 158 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 CA5BQ9Y2D0 317 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 WNT9AO14904 365 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 NDUFS3O75489 264 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 ELP6Q0PNE2 266 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 NAB1Q13506 487 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 HECTD2Q5U5R9 776 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 GDAP1Q8TB36 358 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 KCNV2Q8TDN2 545 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 DTD2Q96FN9 168 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 MBNL1Q9NR56 388 aaKnown RBP13.78□□□□□ -0.2
PMS1-201ENST00000342075 GRID1Q9ULK0 1009 aa13.78□□□□□ -0.2
PMS1-201ENST00000342075 ITGALP20701 1170 aa13.77□□□□□ -0.2
PMS1-201ENST00000342075 ACRV1P26436 265 aa13.77□□□□□ -0.2
PMS1-201ENST00000342075 CSE1LP55060 971 aaKnown RBP13.77□□□□□ -0.2
PMS1-201ENST00000342075 PPP2R2AP63151 447 aa13.77□□□□□ -0.2
PMS1-201ENST00000342075 SDCCAG8Q86SQ7 713 aaPredicted RBP13.77□□□□□ -0.2
PMS1-201ENST00000342075 BEND7Q8N7W2 519 aaPredicted RBP13.77□□□□□ -0.2
PMS1-201ENST00000342075 BANPQ8N9N5 519 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms