RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 PRPSAP1Q14558 356 aa12.13□□□□□ -0.47
TMEM220-201ENST00000341871 SLC9B1Q4ZJI4 515 aa12.13□□□□□ -0.47
TMEM220-201ENST00000341871 ZNF789Q5FWF6 425 aa12.13□□□□□ -0.47
TMEM220-201ENST00000341871 RAP1GAP2Q684P5 730 aa12.13□□□□□ -0.47
TMEM220-201ENST00000341871 MBLAC2Q68D91 279 aa12.13□□□□□ -0.47
TMEM220-201ENST00000341871 CHST15Q7LFX5 561 aaPredicted RBP12.13□□□□□ -0.47
TMEM220-201ENST00000341871 USP13Q92995 863 aaPredicted RBP12.13□□□□□ -0.47
TMEM220-201ENST00000341871 DMRTB1Q96MA1 342 aa12.13□□□□□ -0.47
TMEM220-201ENST00000341871 HOXD1Q9GZZ0 328 aa12.13□□□□□ -0.47
TMEM220-201ENST00000341871 PNPLA8Q9NP80 782 aa12.13□□□□□ -0.47
TMEM220-201ENST00000341871 GTSE1Q9NYZ3 720 aa12.13□□□□□ -0.47
TMEM220-201ENST00000341871 LOC285556D6RIA3 1793 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 PLXNA1Q9UIW2 1896 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 ZNF638Q14966 1978 aaKnown RBP12.12□□□□□ -0.47
TMEM220-201ENST00000341871 CLDN25C9JDP6 229 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 TADA2AO75478 443 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 NME5P56597 212 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 CTBSQ01459 385 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 SLC13A2Q13183 592 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 TRIM25Q14258 630 aaKnown RBP12.12□□□□□ -0.47
TMEM220-201ENST00000341871 GNA13Q14344 377 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 DSC3Q14574 896 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 INAVAQ3KP66 663 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 SLC51BQ86UW2 128 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 THEM5Q8N1Q8 247 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 CPSF7Q8N684 471 aaKnown RBP12.12□□□□□ -0.47
TMEM220-201ENST00000341871 BPIFB6Q8NFQ5 453 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 MAPK15Q8TD08 544 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 SMIM14Q96QK8 99 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 OR52B2Q96RD2 323 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 TMEM246Q9BRR3 403 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 SPON2Q9BUD6 331 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 HMG20AQ9NP66 347 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 PNPLA3Q9NST1 481 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 TRAF6Q9Y4K3 522 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 KCTD3Q9Y597 815 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 ZCWPW2A0A1B0GU75 182 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 H3BNH8 94 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 M0QX08 132 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 MTSS1O43312 755 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 SCO1O75880 301 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 HLA-DQB2P05538 268 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 CD86P42081 329 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 SEPHS1P49903 392 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 SLC12A2P55011 1212 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 PKNOX1P55347 436 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 FAM171A1Q5VUB5 890 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 UGT3A1Q6NUS8 523 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 MAVSQ7Z434 540 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 FBXW8Q8N3Y1 598 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 PKP2Q99959 881 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 COG4Q9H9E3 785 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 NMRAL1Q9HBL8 299 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 RPRD1BQ9NQG5 326 aaKnown RBP12.12□□□□□ -0.47
TMEM220-201ENST00000341871 ADPRHL2Q9NX46 363 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 TOR4AQ9NXH8 423 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 KCNK4Q9NYG8 393 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 PKD2L2Q9NZM6 624 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 RNF11Q9Y3C5 154 aa12.12□□□□□ -0.47
TMEM220-201ENST00000341871 CAPN14A8MX76 684 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 B8ZZF3 427 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 HHLA1C9JL84 531 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 CLASP2O75122 1294 aaKnown RBP12.11□□□□□ -0.47
TMEM220-201ENST00000341871 AHSGP02765 367 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 JUNP05412 331 aaKnown RBP12.11□□□□□ -0.47
TMEM220-201ENST00000341871 POLR2CP19387 275 aaPredicted RBP12.11□□□□□ -0.47
TMEM220-201ENST00000341871 BMPR1AP36894 532 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 OPRL1P41146 370 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 CHRNEQ04844 493 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 ADGRE1Q14246 886 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 PAFAH1B3Q15102 231 aaKnown RBP12.11□□□□□ -0.47
TMEM220-201ENST00000341871 GEN1Q17RS7 908 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 C10orf120Q5SQS8 335 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 PDPK2PQ6A1A2 396 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 SPARTQ8N0X7 666 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 CACTIN-AS1Q8N1I8 211 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 PIAS4Q8N2W9 510 aaPredicted RBP12.11□□□□□ -0.47
TMEM220-201ENST00000341871 TRIM63Q969Q1 353 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 NXNL1Q96CM4 212 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 TEKT5Q96M29 485 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 RBBP8Q99708 897 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 MAT2BQ9NZL9 334 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 SLC45A1Q9Y2W3 748 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 SNX13Q9Y5W8 968 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 ATP6AP2A0A1C7CYW4 349 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 FAM172BPA6NC97 362 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 C9JVG2 144 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 hCG_2039718K7EN88 272 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 AOC2O75106 756 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 DEAF1O75398 565 aaPredicted RBP12.11□□□□□ -0.47
TMEM220-201ENST00000341871 ATP6AP2O75787 350 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 KLHL2O95198 593 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 GSRP00390 522 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 HAPLN1P10915 354 aaPredicted RBP12.11□□□□□ -0.47
TMEM220-201ENST00000341871 PCNAP12004 261 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 CCR1P32246 355 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 HK2P52789 917 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 CTAG1AP78358 180 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 DSC2Q02487 901 aa12.11□□□□□ -0.47
TMEM220-201ENST00000341871 PMS2P3Q13401 168 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms