RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CATSPERZQ9NTU4 200 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 CHCHD3Q9NX63 227 aaKnown RBP14.33□□□□□ -0.12
CPSF7-201ENST00000340437 ANAPC2Q9UJX6 822 aa14.33□□□□□ -0.12
CPSF7-201ENST00000340437 RAMP2O60895 175 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 GUCA1CO95843 209 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 LDLRP01130 860 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 ALBP02768 609 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 NUP107P57740 925 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 MRPS6P82932 125 aaKnown RBP14.32□□□□□ -0.12
CPSF7-201ENST00000340437 PTPRNQ16849 979 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 AARS2Q5JTZ9 985 aaKnown RBP14.32□□□□□ -0.12
CPSF7-201ENST00000340437 ANKS6Q68DC2 871 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 SMYD5Q6GMV2 418 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 TBPL2Q6SJ96 375 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 OR4K2Q8NGD2 314 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 DPF3Q92784 378 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 IMP4Q96G21 291 aaKnown RBP14.32□□□□□ -0.12
CPSF7-201ENST00000340437 CENPNQ96H22 339 aaPredicted RBP14.32□□□□□ -0.12
CPSF7-201ENST00000340437 ADAM2Q99965 735 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 DGCR6LQ9BY27 220 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 OSBPL6Q9BZF3 934 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 PKD2L2Q9NZM6 624 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 IKZF3Q9UKT9 509 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 CNOT11Q9UKZ1 510 aaKnown RBP14.32□□□□□ -0.12
CPSF7-201ENST00000340437 ABT1Q9ULW3 272 aaKnown RBP14.32□□□□□ -0.12
CPSF7-201ENST00000340437 DOCK3Q8IZD9 2030 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 PTGES3LE9PB15 166 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 OR4F21O95013 312 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 OR1G1P47890 313 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 ZNF157P51786 506 aaPredicted RBP14.32□□□□□ -0.12
CPSF7-201ENST00000340437 FOXD4Q12950 439 aaPredicted RBP14.32□□□□□ -0.12
CPSF7-201ENST00000340437 RAB39AQ14964 217 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 ZRANB3Q5FWF4 1079 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 BRMS1LQ5PSV4 323 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 PGBD5Q8N414 524 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 OR4L1Q8NH43 312 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 SGCDQ92629 289 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 ACBD6Q9BR61 282 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 CHID1Q9BWS9 393 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 ARMC7Q9H6L4 198 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 NEU3Q9UQ49 428 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 DGKBQ9Y6T7 804 aa14.32□□□□□ -0.12
CPSF7-201ENST00000340437 NOBOXO60393 691 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 RPS9P46781 194 aaKnown RBP14.31□□□□□ -0.12
CPSF7-201ENST00000340437 ALDH3B2P48448 385 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 POLD2P49005 469 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 CPT1AP50416 773 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 BFSP2Q13515 415 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 GRB14Q14449 540 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 FBXL22Q6P050 247 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 FAM117BQ6P1L5 589 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 ANKFN1Q8N957 763 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 PTCD2Q8WV60 388 aaKnown RBP14.31□□□□□ -0.12
CPSF7-201ENST00000340437 HOPXQ9BPY8 73 aaPredicted RBP14.31□□□□□ -0.12
CPSF7-201ENST00000340437 ZYG11BQ9C0D3 744 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 EIF2B4Q9UI10 523 aaKnown RBP14.31□□□□□ -0.12
CPSF7-201ENST00000340437 MUSKO15146 869 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 OR1I1O60431 355 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 ECI2O75521 394 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 ZBTB11O95625 1053 aaPredicted RBP14.31□□□□□ -0.12
CPSF7-201ENST00000340437 CHEK2O96017 543 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 BMP2P12643 396 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 OR4D2P58180 307 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 GNA12Q03113 381 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 ABRAXAS1Q6UWZ7 409 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 ADGRG5Q8IZF4 528 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 SIDT2Q8NBJ9 832 aaKnown RBP14.31□□□□□ -0.12
CPSF7-201ENST00000340437 ROPN1LQ96C74 230 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 MUS81Q96NY9 551 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 FANCEQ9HB96 536 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 U3KQV3 271 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 WDR90Q96KV7 1748 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 SLC7A4O43246 635 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 NIPSNAP2O75323 286 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 CYBBP04839 570 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 ZNF37AP17032 561 aaPredicted RBP14.31□□□□□ -0.12
CPSF7-201ENST00000340437 PHEXP78562 749 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 ZBED5Q49AG3 693 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 HS3ST5Q8IZT8 346 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 TRPV3Q8NET8 790 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 OR7D4Q8NG98 312 aa14.31□□□□□ -0.12
CPSF7-201ENST00000340437 SEPT5Q99719 369 aaPredicted RBP14.31□□□□□ -0.12
CPSF7-201ENST00000340437 SMPD3Q9NY59 655 aaPredicted RBP14.31□□□□□ -0.12
CPSF7-201ENST00000340437 A0A0D9SEW6 157 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 ZBBXA8MT70 800 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 FXYD1O00168 92 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 GSTA4O15217 222 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 LDB2O43679 373 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 CACNG3O60359 315 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 ZNF189O75820 626 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 MS4A13Q5J8X5 152 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 GLYATQ6IB77 296 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 MILR1Q7Z6M3 343 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 PATL1Q86TB9 770 aaKnown RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 BIRC7Q96CA5 298 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 CCDC138Q96M89 665 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 THUMPD3Q9BV44 507 aaKnown RBP14.3□□□□□ -0.12
CPSF7-201ENST00000340437 MFSD1Q9H3U5 465 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 PADI3Q9ULW8 664 aa14.3□□□□□ -0.12
CPSF7-201ENST00000340437 E5RI56 91 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms