RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 AAK1Q2M2I8 961 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 UAP1L1Q3KQV9 507 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 RNF219Q5W0B1 726 aaPredicted RBP11.89□□□□□ -0.51
USP1-201ENST00000339950 OGFOD2Q6N063 350 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 SLC22A15Q8IZD6 547 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 DHRSXQ8N5I4 330 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 C2orf73Q8N5S3 287 aaPredicted RBP11.89□□□□□ -0.51
USP1-201ENST00000339950 TRIM15Q9C019 465 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 PCDH12Q9NPG4 1184 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 TLR9Q9NR96 1032 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 UBA2Q9UBT2 640 aaPredicted RBP11.89□□□□□ -0.51
USP1-201ENST00000339950 CD84Q9UIB8 345 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 TCAF2A6NFQ2 919 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 CCNCP24863 283 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 SH3BP2P78314 561 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 CLCQ05315 142 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 SIM2Q14190 667 aaPredicted RBP11.89□□□□□ -0.51
USP1-201ENST00000339950 SQLEQ14534 574 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 FAM110CQ1W6H9 321 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 PIK3R6Q5UE93 754 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 PATL1Q86TB9 770 aaKnown RBP11.89□□□□□ -0.51
USP1-201ENST00000339950 RTL3Q8N8U3 475 aaKnown RBP11.89□□□□□ -0.51
USP1-201ENST00000339950 PTERQ96BW5 349 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 ITCHQ96J02 903 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 SELENONQ9NZV5 590 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 GABRQQ9UN88 632 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 SIPA1L1O43166 1804 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 ALDH1A2O94788 518 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 LDLRP01130 860 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 FUT4P22083 530 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 IL5RAQ01344 420 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 SPIDRQ14159 915 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 VARS2Q5ST30 1063 aaKnown RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 STEAP4Q687X5 459 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 LSMEM2Q8N112 164 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 MYLIPQ8WY64 445 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.88□□□□□ -0.51
USP1-201ENST00000339950 OSBPL2Q9H1P3 480 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 STN1Q9H668 368 aaKnown RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 PRPF19Q9UMS4 504 aaKnown RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 ATP11BQ9Y2G3 1177 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 DERAQ9Y315 318 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 FADS3Q9Y5Q0 445 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 ZFP37Q9Y6Q3 630 aaPredicted RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 COL2A1P02458 1487 aaPredicted RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 ALDH2P05091 517 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 CAPN1P07384 714 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 XPAP23025 273 aaPredicted RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 CLCN5P51795 746 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 CHRNB3Q05901 458 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 MAPRE1Q15691 268 aaKnown RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 SPRYD7Q5W111 196 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 TMCO5AQ8N6Q1 288 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 PSD4Q8NDX1 1056 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 SCLYQ96I15 445 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 NFKBIZQ9BYH8 718 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 ASB8Q9H765 288 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 OSER1Q9NX31 292 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 PTCH2Q9Y6C5 1203 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 COL11A2P13942 1736 aaPredicted RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 A0A087X1B8 175 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 TYW5A2RUC4 315 aaKnown RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 H2AFYO75367 372 aaKnown RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 NAB1Q13506 487 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 ZNF423Q2M1K9 1284 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 STXBP5Q5T5C0 1151 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 ZFP1Q6P2D0 407 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 MBOAT1Q6ZNC8 495 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 USP50Q70EL3 339 aaPredicted RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 ARMCX6Q7L4S7 300 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 KBTBD6Q86V97 674 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 SLC22A9Q8IVM8 553 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 HS3ST5Q8IZT8 346 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 RAET1EQ8TD07 263 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 EEF1AKMT1Q8WVE0 214 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 DACT3Q96B18 629 aaPredicted RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 PRKD2Q9BZL6 878 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 CLPBQ9H078 707 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 EIF2B3Q9NR50 452 aaKnown RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 INTS7Q9NVH2 962 aaKnown RBP11.88□□□□□ -0.51
USP1-201ENST00000339950 NDUFA13Q9P0J0 144 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 CDC14AQ9UNH5 594 aa11.88□□□□□ -0.51
USP1-201ENST00000339950 MAGEA3P43357 314 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 NEK2P51955 445 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 MLLT6P55198 1093 aaPredicted RBP11.87□□□□□ -0.51
USP1-201ENST00000339950 METTL21CQ5VZV1 264 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 CHSY3Q70JA7 882 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 CAMK1DQ8IU85 385 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 OR52B6Q8NGF0 335 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 STAG3L4Q8TBR4 150 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 TPD52L3Q96J77 140 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 FCRL5Q96RD9 977 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 ATG10Q9H0Y0 220 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 UNC93B1Q9H1C4 597 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 SLC25A51Q9H1U9 297 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 TLR8Q9NR97 1041 aaKnown RBP11.87□□□□□ -0.51
USP1-201ENST00000339950 RASSF1Q9NS23 344 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 SNX5Q9Y5X3 404 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 USP3Q9Y6I4 520 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 A0A1B0GTL3 188 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms