RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 HOXD9P28356 352 aaPredicted RBP16.24■□□□□ 0.19
LITAF-201ENST00000339430 SLC26A3P40879 764 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 SCNN1BP51168 640 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 RPS24P62847 133 aaKnown RBP16.24■□□□□ 0.19
LITAF-201ENST00000339430 TRIM25Q14258 630 aaKnown RBP16.24■□□□□ 0.19
LITAF-201ENST00000339430 GK3PQ14409 553 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 ARMC3Q5W041 872 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 TCEAL8Q8IYN2 117 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 SPPL3Q8TCT6 385 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 TRPC4APQ8TEL6 797 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 POF1BQ8WVV4 589 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 CDKN2AIPNLQ96HQ2 116 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 TRMOQ9BU70 441 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 IL1RL2Q9HB29 575 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 COMMD8Q9NX08 183 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 UBAP1Q9NZ09 502 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 EPS15L1Q9UBC2 864 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 AP4B1Q9Y6B7 739 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 ANKRD36A6QL64 1941 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 HIDE1A8MVS5 230 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 TGM5O43548 720 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 AHCYL1O43865 530 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 NRP2O60462 931 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 PGM3O95394 542 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 MTHFD2P13995 350 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 STC1P52823 247 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 TWF1Q12792 350 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 GRM2Q14416 872 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 UGT3A2Q3SY77 523 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 LIN52Q52LA3 116 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 C6orf52Q5T4I8 152 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 PLPP4Q5VZY2 271 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 SLC30A9Q6PML9 568 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 DDIASQ8IXT1 998 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 CLYBLQ8N0X4 340 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 LPGAT1Q92604 370 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 SLC45A3Q96JT2 553 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 CYP2S1Q96SQ9 504 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 AARSD1Q9BTE6 412 aaKnown RBP16.23■□□□□ 0.19
LITAF-201ENST00000339430 TTLL2Q9BWV7 592 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 FAM192AQ9GZU8 254 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 NACA2Q9H009 215 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 LZTS1Q9Y250 596 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 RWDD3Q9Y3V2 267 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 CHD5Q8TDI0 1954 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 GBF1Q92538 1859 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 PIP5K1BO14986 540 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 RHOBTB1O94844 696 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 NDST3O95803 873 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 HMGA1P17096 107 aaKnown RBP16.23■□□□□ 0.19
LITAF-201ENST00000339430 CDKN1CP49918 316 aaPredicted RBP16.23■□□□□ 0.19
LITAF-201ENST00000339430 STX1BP61266 288 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 NFKB2Q00653 900 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 GNA12Q03113 381 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 RING1Q06587 406 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 TAF12Q16514 161 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 PAQR3Q6TCH7 311 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 FUNDC1Q8IVP5 155 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 OR4K2Q8NGD2 314 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 GPR150Q8NGU9 434 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 LRCH3Q96II8 777 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 CEP295NLQ96MC4 621 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 ZNF512Q96ME7 567 aaPredicted RBP16.23■□□□□ 0.19
LITAF-201ENST00000339430 CENPKQ9BS16 269 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 CINPQ9BW66 212 aaPredicted RBP16.23■□□□□ 0.19
LITAF-201ENST00000339430 SPAG4Q9NPE6 437 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 SUCOQ9UBS9 1254 aaKnown RBP16.23■□□□□ 0.19
LITAF-201ENST00000339430 IKZF3Q9UKT9 509 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 BTRCQ9Y297 605 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 INSL5Q9Y5Q6 135 aa16.23■□□□□ 0.19
LITAF-201ENST00000339430 A0A1B0GTL3 188 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 SUPT3HB4E1H0 165 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 NR5A2O00482 541 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 TRIM24O15164 1050 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 SUPT3HO75486 399 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 SRP72O76094 671 aaKnown RBP16.22■□□□□ 0.19
LITAF-201ENST00000339430 GRB7Q14451 532 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 PTPRRQ15256 657 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 GLT6D1Q7Z4J2 308 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 RAB44Q7Z6P3 723 aaPredicted RBP16.22■□□□□ 0.19
LITAF-201ENST00000339430 TICAM1Q8IUC6 712 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 DENND1CQ8IV53 801 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 TMEM102Q8N9M5 508 aaPredicted RBP16.22■□□□□ 0.19
LITAF-201ENST00000339430 TWIST2Q8WVJ9 160 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 TRIB3Q96RU7 358 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 ATOH8Q96SQ7 321 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 SLC25A23Q9BV35 468 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 TLR9Q9NR96 1032 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 CROTQ9UKG9 612 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 A0A0U1RQS6 177 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 NCF1BA6NI72 391 aaPredicted RBP16.22■□□□□ 0.19
LITAF-201ENST00000339430 NCF1CA8MVU1 366 aaPredicted RBP16.22■□□□□ 0.19
LITAF-201ENST00000339430 ADH1AP07327 375 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 ZDHHC11BP0C7U3 371 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 NCF1P14598 390 aaPredicted RBP16.22■□□□□ 0.19
LITAF-201ENST00000339430 SGSHP51688 502 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 SLC7A2P52569 658 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 IRX1P78414 480 aaPredicted RBP16.22■□□□□ 0.19
LITAF-201ENST00000339430 CDKL1Q00532 357 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 ECT2LQ008S8 904 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms