RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 PFDN6O15212 129 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 CISD3P0C7P0 127 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 RECQLP46063 649 aaPredicted RBP22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 NFATC2Q13469 925 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 CHRNA6Q15825 494 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 POM121L1PQ3SYA9 428 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 GPR26Q8NDV2 337 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 BPIFB1Q8TDL5 484 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 FRS2Q8WU20 508 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 SLC2A11Q9BYW1 496 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 BRD9Q9H8M2 597 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 DNAJC28Q9NX36 388 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 TSR3Q9UJK0 312 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 GOLGA8QA0A0J9YX86 632 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 GLYATL1P3A0A0U1RQE8 302 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 GOLGA8OA6NCC3 632 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 GOLGA8NF8WBI6 632 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 LINC01565O15544 149 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 TULP3O75386 442 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 ATP5HO75947 161 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 TSPAN8P19075 237 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 PTGER3P43115 390 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 SLC6A11P48066 632 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 DNAJB13P59910 316 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 GDPD4Q6W3E5 623 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 TPRG1Q6ZUI0 275 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 USP45Q70EL2 814 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 CLDN19Q8N6F1 224 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 PTCD3Q96EY7 689 aaKnown RBP22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 OSBPL1AQ9BXW6 950 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 ABCG8Q9H221 673 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 SLC28A3Q9HAS3 691 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 SYTL2Q9HCH5 934 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 FBXO10Q9UK96 956 aa22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 OAS3Q9Y6K5 1087 aaKnown RBP22.28■■□□□ 1.16
PDLIM2-203ENST00000339162 E5RI56 91 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 UBXN8O00124 270 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 NEMP1O14524 444 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 VPS26AO75436 327 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 LEFTY1O75610 366 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 RASSF9O75901 435 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 JUNP05412 331 aaKnown RBP22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 CPA2P48052 419 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 PTSQ03393 145 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 ASPHQ12797 758 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 PRKAA1Q13131 559 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 SPDYAQ5MJ70 313 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 EPGNQ6UW88 154 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 PIWIL4Q7Z3Z4 852 aaKnown RBP22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 SMARCD2Q92925 531 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 NSL1Q96IY1 281 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 P2RY12Q9H244 342 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 WDR55Q9H6Y2 383 aaPredicted RBP22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 FIS1Q9Y3D6 152 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 CFAP73A6NFT4 308 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 PRR5-ARHGAP8B1AHC4 643 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 CDC7O00311 574 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 MATN2O00339 956 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 CCDC22O60826 627 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 ADH1CP00326 375 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 ENO1P06733 434 aaKnown RBP22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 SERPINA6P08185 405 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 ITGB6P18564 788 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 NNMTP40261 264 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 ARHGAP8P85298 464 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 ILF2Q12905 390 aaKnown RBP22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 ARSIQ5FYB1 569 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 SNX20Q7Z614 316 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 CD200R1Q8TD46 325 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 EEF1AKMT1Q8WVE0 214 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 ZNF641Q96N77 438 aaPredicted RBP22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 LYSMD1Q96S90 227 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 NUF2Q9BZD4 464 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 LRMDAQ9H2I8 198 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 B4GALT6Q9UBX8 382 aa22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 TRMT6Q9UJA5 497 aaKnown RBP22.27■■□□□ 1.16
PDLIM2-203ENST00000339162 HEPACAM2A8MVW5 462 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 CAPN14A8MX76 684 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 NPHS1O60500 1241 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 PYGLP06737 847 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 TSNQ15631 228 aaKnown RBP22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 FBXO48Q5FWF7 155 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 SH2D4BQ5SQS7 431 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 CPNE9Q8IYJ1 553 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 NXPE3Q969Y0 559 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 CCDC126Q96EE4 140 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 OR52B2Q96RD2 323 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 CCDC106Q9BWC9 280 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 TNFRSF12AQ9NP84 129 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 GTSE1Q9NYZ3 720 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 APPL1Q9UKG1 709 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 PRSS21Q9Y6M0 314 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 WASF2Q9Y6W5 498 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 LRRC14BA6NHZ5 514 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 E9PBE3 544 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 PRMT5O14744 637 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 GRID2O43424 1007 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 KLHL41O60662 606 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms