RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TAF8Q7Z7C8 310 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 TTC30BQ8N4P2 665 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 SLC25A41Q8N5S1 370 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 ARL10Q8N8L6 244 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 DCBLD1Q8N8Z6 715 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 GPR156Q8NFN8 814 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 IPMKQ8NFU5 416 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 SLC35B2Q8TB61 432 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 CCDC110Q8TBZ0 833 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 SPATA13Q96N96 652 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 SUDS3Q9H7L9 328 aaPredicted RBP15.16■□□□□ 0.02
PRKN-201ENST00000338468 GULP1Q9UBP9 304 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 PADI4Q9UM07 663 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 DOLKQ9UPQ8 538 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 PLEKHM1Q9Y4G2 1056 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 KALRNO60229 2985 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 RP1P56715 2156 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 MT-CO3P00414 261 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 AGTP01019 485 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 SLC4A1P02730 911 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 ATP1A1P05023 1023 aaKnown RBP15.15■□□□□ 0.02
PRKN-201ENST00000338468 CCDC175P0C221 793 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 AK4P27144 223 aaPredicted RBP15.15■□□□□ 0.02
PRKN-201ENST00000338468 PSMB4P28070 264 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 ADCY8P40145 1251 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 DCDC1P59894 354 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 OLIG2Q13516 323 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 ALS2CLQ60I27 953 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 KLHDC8BQ8IXV7 354 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 CACTIN-AS1Q8N1I8 211 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 TTC13Q8NBP0 860 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 SCG3Q8WXD2 468 aaKnown RBP15.15■□□□□ 0.02
PRKN-201ENST00000338468 CRELD1Q96HD1 420 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 DCBLD2Q96PD2 775 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 GPR63Q9BZJ6 419 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 LZTFL1Q9NQ48 299 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 SPATS2LQ9NUQ6 558 aaKnown RBP15.15■□□□□ 0.02
PRKN-201ENST00000338468 TRNAU1APQ9NX07 287 aaKnown RBP15.15■□□□□ 0.02
PRKN-201ENST00000338468 RABGEF1Q9UJ41 708 aa15.15■□□□□ 0.02
PRKN-201ENST00000338468 C5orf60A6NFR6 353 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 DNAJC6O75061 913 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 HLA-DPA1P20036 260 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 RPIAP49247 311 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 GEMP55040 296 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 GDF10P55107 478 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 CTBSQ01459 385 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 PYCR3Q53H96 274 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 ITPRIPL1Q6GPH6 555 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 CCDC70Q6NSX1 233 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 RANBP10Q6VN20 620 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 MARK2Q7KZI7 788 aaKnown RBP15.14■□□□□ 0.01
PRKN-201ENST00000338468 FAM71DQ8N9W8 422 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 FAM46DQ8NEK8 389 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 MAPK15Q8TD08 544 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 ATG4AQ8WYN0 398 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 GLMNQ92990 594 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 SRPK1Q96SB4 655 aaKnown RBP15.14■□□□□ 0.01
PRKN-201ENST00000338468 FICDQ9BVA6 458 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 TRABDQ9H4I3 376 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 BPIFA1Q9NP55 256 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 EVA1BQ9NVM1 165 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 TMPRSS11EQ9UL52 423 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 CLCA2Q9UQC9 943 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 PPP2R2CQ9Y2T4 447 aa15.14■□□□□ 0.01
PRKN-201ENST00000338468 ARHGEF17Q96PE2 2063 aaPredicted RBP15.13■□□□□ 0.01
PRKN-201ENST00000338468 GOLGA6L9A6NEM1 432 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 TK2O00142 265 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 ANXA9O76027 345 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 FGF1P05230 155 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 HMGCLP35914 325 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 MSLNQ13421 630 aaPredicted RBP15.13■□□□□ 0.01
PRKN-201ENST00000338468 HLTFQ14527 1009 aaKnown RBP eCLIP15.13■□□□□ 0.01
PRKN-201ENST00000338468 ZNF648Q5T619 568 aaPredicted RBP15.13■□□□□ 0.01
PRKN-201ENST00000338468 DENND5AQ6IQ26 1287 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 C17orf82Q86X59 251 aaPredicted RBP15.13■□□□□ 0.01
PRKN-201ENST00000338468 SLC13A5Q86YT5 568 aaPredicted RBP15.13■□□□□ 0.01
PRKN-201ENST00000338468 TRAM1L1Q8N609 369 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 UBE2Q2Q8WVN8 375 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 NAT6Q93015 286 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 CCDC74AQ96AQ1 378 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 NXPE2Q96DL1 559 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 OR2M4Q96R27 311 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 APOL2Q9BQE5 337 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 SPATA16Q9BXB7 569 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 CDH19Q9H159 772 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 ARFGAP3Q9NP61 516 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 IL17CQ9P0M4 197 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 TAAR2Q9P1P5 351 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 VPS18Q9P253 973 aa15.13■□□□□ 0.01
PRKN-201ENST00000338468 GOLGA6L3A6NEY3 463 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 B4DGG1 531 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 METTL18O95568 372 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 ASMTLO95671 621 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 PRB1P04280 392 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 PTMAP06454 111 aaKnown RBP15.12■□□□□ 0.01
PRKN-201ENST00000338468 CA5AP35218 305 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 ILF3Q12906 894 aaKnown RBP eCLIP15.12■□□□□ 0.01
PRKN-201ENST00000338468 RPS6KA1Q15418 735 aa15.12■□□□□ 0.01
PRKN-201ENST00000338468 SIX1Q15475 284 aaPredicted RBP15.12■□□□□ 0.01
PRKN-201ENST00000338468 OASLQ15646 514 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms