RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 PATE1Q8WXA2 126 aa10.59□□□□□ -0.71
CAPN3-202ENST00000337571 SH3KBP1Q96B97 665 aa10.59□□□□□ -0.71
CAPN3-202ENST00000337571 CCDC74BQ96LY2 380 aa10.59□□□□□ -0.71
CAPN3-202ENST00000337571 NUDT22Q9BRQ3 303 aa10.59□□□□□ -0.71
CAPN3-202ENST00000337571 MLPHQ9BV36 600 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-202ENST00000337571 TDRD1Q9BXT4 1180 aaKnown RBP10.59□□□□□ -0.71
CAPN3-202ENST00000337571 ASPSCR1Q9BZE9 553 aa10.59□□□□□ -0.71
CAPN3-202ENST00000337571 FAM117AQ9C073 453 aa10.59□□□□□ -0.71
CAPN3-202ENST00000337571 FAM83DQ9H4H8 585 aa10.59□□□□□ -0.71
CAPN3-202ENST00000337571 RMI1Q9H9A7 625 aa10.59□□□□□ -0.71
CAPN3-202ENST00000337571 PKD2L2Q9NZM6 624 aa10.59□□□□□ -0.71
CAPN3-202ENST00000337571 PLEKHM1Q9Y4G2 1056 aa10.59□□□□□ -0.71
CAPN3-202ENST00000337571 HEY1Q9Y5J3 304 aa10.59□□□□□ -0.71
CAPN3-202ENST00000337571 IGHV1OR21-1A0A087WYE8 117 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 C9orf172C9J069 976 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 PPM1DO15297 605 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 CBFA2T2O43439 604 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 JCHAINP01591 159 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 ITGB2P05107 769 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 SFTPCP11686 197 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 CCL4P13236 92 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 SLC2A4P14672 509 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 PTMSP20962 102 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 KDELR1P24390 212 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 MAN1A1P33908 653 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 CD86P42081 329 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 ATP1A2P50993 1020 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 GBE1Q04446 702 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 AP1B1Q10567 949 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 SQSTM1Q13501 440 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 MESDQ14696 234 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 SLC18A3Q16572 532 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 ALG1LQ6GMV1 187 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 CCDC70Q6NSX1 233 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 TMEM71Q6P5X7 295 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 OR8K1Q8NGG5 319 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 ARRDC2Q8TBH0 407 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 HDAC11Q96DB2 347 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 COX14Q96I36 57 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 RNF157Q96PX1 679 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 SMIM14Q96QK8 99 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 AGAP2Q99490 1192 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 VPS18Q9P253 973 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 HEMK1Q9Y5R4 338 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-202ENST00000337571 ST14Q9Y5Y6 855 aa10.58□□□□□ -0.72
CAPN3-202ENST00000337571 LRRD1A4D1F6 860 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 BHMG1C9JSJ3 638 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-202ENST00000337571 DUX1O43812 170 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 SNX2O60749 519 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 ZIC2O95409 532 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-202ENST00000337571 SOD1P00441 154 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 ATP1A1P05023 1023 aaKnown RBP10.57□□□□□ -0.72
CAPN3-202ENST00000337571 HLA-DQB2P05538 268 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 FGF3P11487 239 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-202ENST00000337571 ZFXP17010 805 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-202ENST00000337571 MPSTP25325 297 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 HNRNPH3P31942 346 aaKnown RBP10.57□□□□□ -0.72
CAPN3-202ENST00000337571 ARHGAP25P42331 645 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 NOP2P46087 812 aaKnown RBP10.57□□□□□ -0.72
CAPN3-202ENST00000337571 FASLGP48023 281 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 SPINT3P49223 89 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 TAS2R40P59535 323 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 HHEXQ03014 270 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 NIPAL4Q0D2K0 466 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 TRIM14Q14142 442 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 DCAF12Q5T6F0 453 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 SLC9B2Q86UD5 537 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 VASH2Q86V25 355 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 FAM129CQ86XR2 697 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 IL22RA1Q8N6P7 574 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 SLC35G2Q8TBE7 412 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 SLC37A2Q8TED4 501 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 LRRN4Q8WUT4 740 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 JPH3Q8WXH2 748 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-202ENST00000337571 CCDC42Q96M95 316 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 LYSMD1Q96S90 227 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-202ENST00000337571 SEMA4CQ9C0C4 833 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 XPO4Q9C0E2 1151 aaKnown RBP10.57□□□□□ -0.72
CAPN3-202ENST00000337571 ZFYVE1Q9HBF4 777 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 RAD18Q9NS91 495 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 SLC39A1Q9NY26 324 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 DTLQ9NZJ0 730 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 FOXJ2Q9P0K8 574 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 PRKAB1Q9Y478 270 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 CFAP46Q8IYW2 2715 aa10.57□□□□□ -0.72
CAPN3-202ENST00000337571 ZFC3H1O60293 1989 aaKnown RBP10.56□□□□□ -0.72
CAPN3-202ENST00000337571 BOD1L1Q8NFC6 3051 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 OR5K4A6NMS3 321 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 A8MU76 341 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 KCNK1O00180 336 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 APOL1O14791 398 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 PPP1R12AO14974 1030 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-202ENST00000337571 GRID2O43424 1007 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 SLC28A2O43868 658 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 SLC25A14O95258 325 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-202ENST00000337571 PRLP01236 227 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 TMEM253P0C7T8 217 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 TNNT3P45378 269 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-202ENST00000337571 RAB15P59190 212 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms