RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 HGFP14210 728 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 TCF4P15884 667 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 MSH3P20585 1137 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 S100A3P33764 101 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 PTP4A2Q12974 167 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 SNAP47Q5SQN1 464 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 ANKRD26P1Q6NSI1 321 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 C1orf127Q8N9H9 656 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 ZNF540Q8NDQ6 660 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 TFAP2BQ92481 460 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 SMAD5Q99717 465 aaKnown RBP16.01■□□□□ 0.15
NPHP3-201ENST00000337331 MRPL57Q9BQC6 102 aaKnown RBP16.01■□□□□ 0.15
NPHP3-201ENST00000337331 MRPL9Q9BYD2 267 aaKnown RBP16.01■□□□□ 0.15
NPHP3-201ENST00000337331 PNPLA8Q9NP80 782 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 KRT84Q9NSB2 600 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 OPTCQ9UBM4 332 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 I3L521 148 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 M0R2N6 131 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 CHRNGP07510 517 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 ZNF37AP17032 561 aaPredicted RBP16.01■□□□□ 0.15
NPHP3-201ENST00000337331 ADRA1BP35368 520 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 GRM5P41594 1212 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 PTPRNQ16849 979 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 ARHGAP15Q53QZ3 475 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 RFPL4BQ6ZWI9 263 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 ASB9Q96DX5 294 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 GATA5Q9BWX5 397 aaPredicted RBP16.01■□□□□ 0.15
NPHP3-201ENST00000337331 SAGE2PA6NJ88 616 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 AP1G1O43747 822 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 DYRK3O43781 588 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 RFX3P48380 749 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 HNRNPFP52597 415 aaKnown RBP16.01■□□□□ 0.15
NPHP3-201ENST00000337331 EPHB3P54753 998 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 MADCAM1Q13477 382 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 TP53BP2Q13625 1128 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 SLC35G1Q2M3R5 365 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 PLEKHG7Q6ZR37 379 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 ZNF621Q6ZSS3 439 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 DAW1Q8N136 415 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 UBE2J2Q8N2K1 259 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 SVOPQ8N4V2 548 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 NAT8LQ8N9F0 302 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 C18orf25Q96B23 403 aaPredicted RBP16.01■□□□□ 0.15
NPHP3-201ENST00000337331 GOLGA2P5Q9HBQ8 144 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 CAPN10Q9HC96 672 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 MIEF1Q9NQG6 463 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 SLC17A6Q9P2U8 582 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 DYRK1BQ9Y463 629 aa16.01■□□□□ 0.15
NPHP3-201ENST00000337331 ANKRD12Q6UB98 2062 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 ZW10O43264 779 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 CILPO75339 1184 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 VPS4BO75351 444 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 AZGP1P25311 298 aaKnown RBP16■□□□□ 0.15
NPHP3-201ENST00000337331 CROCCQ5TZA2 2017 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 TMEM236Q5W0B7 351 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 PGBD3Q8N328 593 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 ZNF276Q8N554 614 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 PNPT1Q8TCS8 783 aaKnown RBP16■□□□□ 0.15
NPHP3-201ENST00000337331 SLC25A13Q9UJS0 675 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 CDH9Q9ULB4 789 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 TNK2Q07912 1038 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 TAB1Q15750 504 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 FAM45BPQ6NSW5 357 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 C16orf59Q7L2K0 433 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 STRADAQ7RTN6 431 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 ZNF467Q7Z7K2 595 aaPredicted RBP16■□□□□ 0.15
NPHP3-201ENST00000337331 TMEM126BQ8IUX1 230 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 CNTD1Q8N815 330 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 MCOLN3Q8TDD5 553 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 LPPQ93052 612 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 MED8Q96G25 268 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 APOBEC3GQ9HC16 384 aaKnown RBP16■□□□□ 0.15
NPHP3-201ENST00000337331 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16■□□□□ 0.15
NPHP3-201ENST00000337331 INVSQ9Y283 1065 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 BTRCQ9Y297 605 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 FADS2O95864 444 aaKnown RBP16■□□□□ 0.15
NPHP3-201ENST00000337331 GPD2P43304 727 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 WNT3AP56704 352 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 SLC25A52Q3SY17 297 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 PDZK1Q5T2W1 519 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 DEFB128Q7Z7B8 93 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 HDAC10Q969S8 669 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 TMEM159Q96B96 161 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 SMOXQ9NWM0 555 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 PDE10AQ9Y233 779 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 PCDHB12Q9Y5F1 795 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 PCDHGA10Q9Y5H3 936 aa16■□□□□ 0.15
NPHP3-201ENST00000337331 IFNA14P01570 189 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 SMIM10L2AP0DMW4 78 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 SMIM10L2BP0DMW5 78 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 E2F2Q14209 437 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 STXBP5Q5T5C0 1151 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 ARHGAP36Q6ZRI8 547 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 DSG4Q86SJ6 1040 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 SPERTQ8NA61 448 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 SLC43A3Q8NBI5 491 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 PIK3R3Q92569 461 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 TPD52L3Q96J77 140 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 EXOC2Q96KP1 924 aa15.99■□□□□ 0.15
NPHP3-201ENST00000337331 RHOJQ9H4E5 214 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms