RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 MLLT6P55198 1093 aaPredicted RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 UFM1P61960 85 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 IL5RAQ01344 420 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 CLCQ05315 142 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 CHRNB3Q05901 458 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SULT2A1Q06520 285 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SPIDRQ14159 915 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SIM2Q14190 667 aaPredicted RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 PERM1Q5SV97 790 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 GRAMD4Q6IC98 578 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 DDX53Q86TM3 631 aaKnown RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 PGAM4Q8N0Y7 254 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 KLHDC9Q8NEP7 349 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 GPR156Q8NFN8 814 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 KLHL32Q96NJ5 620 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 TRAPPC9Q96Q05 1148 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SLC29A1Q99808 456 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 ACBD6Q9BR61 282 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SPATA16Q9BXB7 569 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 PRKD2Q9BZL6 878 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 MAF1Q9H063 256 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SMG9Q9H0W8 520 aaKnown RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 ZDHHC4Q9NPG8 344 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SLAMF8Q9P0V8 285 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 KIF17Q9P2E2 1029 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 ORC6Q9Y5N6 252 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 MAGED1Q9Y5V3 778 aaPredicted RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 ATG2BQ96BY7 2078 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 NRXN2Q9P2S2 1712 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 CDH23Q9H251 3354 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 AP3B1O00203 1094 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 GRID2O43424 1007 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 KPNA6O60684 536 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 HIST1H2AGP0C0S8 130 aaPredicted RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 HIST1H2ADP20671 130 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 GJA8P48165 433 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 MTTPP55157 894 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 CYP4F2P78329 520 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 CYP4F3Q08477 520 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 GALNT2Q10471 571 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 VEPH1Q14D04 833 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 STXBP5Q5T5C0 1151 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 PIK3R6Q5UE93 754 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 FBXL19Q6PCT2 694 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 ZNF621Q6ZSS3 439 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 ANKRD23Q86SG2 305 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 PDSS2Q86YH6 399 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SLC22A9Q8IVM8 553 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 EEF1AKMT1Q8WVE0 214 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 CCDC126Q96EE4 140 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 HIST1H2AHQ96KK5 128 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 HIST1H2AJQ99878 128 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 H2AFJQ9BTM1 129 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 TRIM15Q9C019 465 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SYTL2Q9HCH5 934 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 TNFRSF12AQ9NP84 129 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 RASSF1Q9NS23 344 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 ARL15Q9NXU5 204 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 TRPM5Q9NZQ8 1165 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SH3BP4Q9P0V3 963 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 ADAM28Q9UKQ2 775 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 AGO1Q9UL18 857 aaKnown RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 RPL26L1Q9UNX3 145 aaKnown RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 SNX5Q9Y5X3 404 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 LY75O60449 1722 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 K7ERQ8 282 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SDHDO14521 159 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 B4GAT1O43505 415 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 AHCYL1O43865 530 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 MZF1P28698 734 aaPredicted RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 MAGEA8P43361 318 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 CDKL1Q00532 357 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 GRB14Q14449 540 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 UPP1Q16831 310 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 MS4A13Q5J8X5 152 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 SLC2A7Q6PXP3 512 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 MBOAT1Q6ZNC8 495 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 ADCK2Q7Z695 626 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 DHRSXQ8N5I4 330 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 CATSPER1Q8NEC5 780 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 OR10A6Q8NH74 314 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 ITFG1Q8TB96 612 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 APBB2Q92870 758 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 OTULINQ96BN8 352 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 NFKBIZQ9BYH8 718 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 DPY30Q9C005 99 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 ZBTB26Q9HCK0 441 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 OSER1Q9NX31 292 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 RCOR3Q9P2K3 495 aaPredicted RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 AASSQ9UDR5 926 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 GIT1Q9Y2X7 761 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 DERAQ9Y315 318 aa8.19□□□□□ -1.1
HPS4-201ENST00000336873 TRIP12Q14669 1992 aaPredicted RBP8.19□□□□□ -1.1
HPS4-201ENST00000336873 TMEM114B3SHH9 223 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 KCNH1O95259 989 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 GNAO1P09471 354 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 CORO1AP31146 461 aaKnown RBP8.18□□□□□ -1.1
HPS4-201ENST00000336873 CPOXP36551 454 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 CLCN5P51795 746 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 SH3BP2P78314 561 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms