RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 LRIG2O94898 1065 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 CPNE6O95741 557 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 LBPP18428 481 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 OXA1LQ15070 435 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 NOMO2Q5JPE7 1267 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 THAP5Q7Z6K1 395 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 SLCO6A1Q86UG4 719 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 C8orf59Q8N0T1 100 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 CADM3Q8N126 398 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 C2CD4AQ8NCU7 369 aaPredicted RBP13.68□□□□□ -0.22
SYNE3-201ENST00000334258 TSPAN17Q96FV3 270 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 KCNA7Q96RP8 456 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 SLC30A3Q99726 388 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 FUNDC2Q9BWH2 189 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 TKTL2Q9H0I9 626 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 ZNF229Q9UJW7 825 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 USP22Q9UPT9 525 aa13.68□□□□□ -0.22
SYNE3-201ENST00000334258 SIP14410 1827 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 TTC24A2A3L6 582 aaPredicted RBP13.67□□□□□ -0.22
SYNE3-201ENST00000334258 YJEFN3A6XGL0 299 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 M0R3G1 203 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 SNAI1O95863 264 aaPredicted RBP13.67□□□□□ -0.22
SYNE3-201ENST00000334258 KCNC1P48547 511 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 SLC26A2P50443 739 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 ATP4BP51164 291 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 DIO3P55073 304 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 ADARB1P78563 741 aaKnown RBP13.67□□□□□ -0.22
SYNE3-201ENST00000334258 SNX17Q15036 470 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 ACAP2Q15057 778 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 CARTPTQ16568 116 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 PFKFB4Q16877 469 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 FBXO48Q5FWF7 155 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 IQSEC1Q6DN90 963 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 RAB44Q7Z6P3 723 aaPredicted RBP13.67□□□□□ -0.22
SYNE3-201ENST00000334258 CNTN4Q8IWV2 1026 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 ZCCHC7Q8N3Z6 543 aaKnown RBP13.67□□□□□ -0.22
SYNE3-201ENST00000334258 LRRC52Q8N7C0 313 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 PTGR2Q8N8N7 351 aaPredicted RBP13.67□□□□□ -0.22
SYNE3-201ENST00000334258 B3GALNT2Q8NCR0 500 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 BIRC7Q96CA5 298 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 DUSP16Q9BY84 665 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 HPS4Q9NQG7 708 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 ATP11BQ9Y2G3 1177 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 CRYL1Q9Y2S2 319 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 VWA7Q9Y334 891 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 LCTP09848 1927 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 DNAJC25-GNG10A0A024R161 153 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 LRRC14BA6NHZ5 514 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 AZIN1O14977 448 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 MYCP01106 439 aaPredicted RBP13.67□□□□□ -0.22
SYNE3-201ENST00000334258 PABPC1P11940 636 aaKnown RBP13.67□□□□□ -0.22
SYNE3-201ENST00000334258 NPR3P17342 541 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 AXLP30530 894 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 FOXA1P55317 472 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 PLIN5Q00G26 463 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 TUBA3CQ13748 450 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 UGT3A2Q3SY77 523 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 PAGE2BQ5JRK9 111 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 ZNF678Q5SXM1 525 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 HECTD2Q5U5R9 776 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 RALGPS2Q86X27 583 aaPredicted RBP13.67□□□□□ -0.22
SYNE3-201ENST00000334258 PARP8Q8N3A8 854 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 ATPAF2Q8N5M1 289 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 NSMCE2Q96MF7 247 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 SH3GL1Q99961 368 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 NFKBIZQ9BYH8 718 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 GPN2Q9H9Y4 310 aaPredicted RBP13.67□□□□□ -0.22
SYNE3-201ENST00000334258 GOLGA2P5Q9HBQ8 144 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 AASDHPPTQ9NRN7 309 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 MGAMO43451 1857 aa13.67□□□□□ -0.22
SYNE3-201ENST00000334258 KPNA6O60684 536 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 LGALS2P05162 132 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 THRBP10828 461 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 ALDH4A1P30038 563 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 ARSFP54793 590 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 FOXD4Q12950 439 aaPredicted RBP13.66□□□□□ -0.22
SYNE3-201ENST00000334258 TRIM32Q13049 653 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 UNC50Q53HI1 259 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 CATSPER4Q7RTX7 472 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 DCP1BQ8IZD4 617 aaKnown RBP13.66□□□□□ -0.22
SYNE3-201ENST00000334258 CNDP2Q96KP4 475 aaKnown RBP13.66□□□□□ -0.22
SYNE3-201ENST00000334258 MROQ9BYG7 248 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 MTRRQ9UBK8 725 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 FBXW11Q9UKB1 542 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 RANBP2P49792 3224 aaKnown RBP13.66□□□□□ -0.22
SYNE3-201ENST00000334258 DEAF1O75398 565 aaPredicted RBP13.66□□□□□ -0.22
SYNE3-201ENST00000334258 USP17L7P0C7H9 530 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 SMPD1P17405 629 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 TSPY1Q01534 308 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 PUS10Q3MIT2 529 aaKnown RBP13.66□□□□□ -0.22
SYNE3-201ENST00000334258 TAPT1Q6NXT6 567 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 SCIMPQ6UWF3 145 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 PIM3Q86V86 326 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 SPARTQ8N0X7 666 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 GOLM1Q8NBJ4 401 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 GABPB2Q8TAK5 448 aaPredicted RBP13.66□□□□□ -0.22
SYNE3-201ENST00000334258 TMEM125Q96AQ2 219 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 NACC2Q96BF6 587 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 COLEC11Q9BWP8 271 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 MROH8Q9H579 483 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms