RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 STOML1Q9UBI4 398 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 NPIPB15A6NHN6 443 aaPredicted RBP20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 OR1I1O60431 355 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 ATP5BP06576 529 aaKnown RBP20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 SUOXP51687 545 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 SYCE2Q6PIF2 218 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 TSPAN33Q86UF1 283 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 TREML1Q86YW5 311 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 SGF29Q96ES7 293 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 BIRC8Q96P09 236 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 ACSS2Q9NR19 701 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 GDE1Q9NZC3 331 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 DNAJC16Q9Y2G8 782 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 MED16Q9Y2X0 877 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 PPIL1Q9Y3C6 166 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 TULP3O75386 442 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 SRP72O76094 671 aaKnown RBP20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 ACADSP16219 412 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 TTPAP49638 278 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 RAP1GDS1P52306 607 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 MESP2Q0VG99 397 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 HYAL1Q12794 435 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 PTPRNQ16849 979 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 TECRLQ5HYJ1 363 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 LIPMQ5VYY2 423 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 CRTC1Q6UUV9 634 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 TAS2R42Q7RTR8 314 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 PLPP6Q8IY26 295 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 WDR60Q8WVS4 1066 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 SREK1Q8WXA9 508 aaKnown RBP20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 SCRN2Q96FV2 425 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 ZNF641Q96N77 438 aaPredicted RBP20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 LYSMD1Q96S90 227 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 SLC30A1Q9Y6M5 507 aa20.17■□□□□ 0.82
RIPPLY3-201ENST00000329553 WASH3PC4AMC7 463 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 GAPDHSO14556 408 aaPredicted RBP20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 MAGEC1O60732 1142 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 NNMTP40261 264 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 SLC26A3P40879 764 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 SLC6A11P48066 632 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 KPNA2P52292 529 aaKnown RBP20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 AQP5P55064 265 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 CACNG1Q06432 222 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 SETMARQ53H47 684 aaPredicted RBP20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 TMEM184AQ6ZMB5 413 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 TMPRSS6Q8IU80 811 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 ETFBKMTQ8IXQ9 262 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 PIWIL2Q8TC59 973 aaKnown RBP20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 PPP2R3CQ969Q6 453 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 FAM83CQ9BQN1 747 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 MTG2Q9H4K7 406 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 PNPOQ9NVS9 261 aa20.16■□□□□ 0.82
RIPPLY3-201ENST00000329553 FCARP24071 287 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 RECQLP46063 649 aaPredicted RBP20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 ACAP2Q15057 778 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 RCN1Q15293 331 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 GAB4Q2WGN9 574 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 TANGO2Q6ICL3 276 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 FAM151BQ6UXP7 276 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 TPRG1Q6ZUI0 275 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 ARHGAP24Q8N264 748 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 DNAJC9Q8WXX5 260 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 CCDC68Q9H2F9 335 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 IL26Q9NPH9 171 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 FAM50BQ9Y247 325 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 SLC27A6Q9Y2P4 619 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 KRT36O76013 467 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 RHOBTB1O94844 696 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 PSMG1O95456 288 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 NFATC1O95644 943 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 BPIP17213 487 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 CA5AP35218 305 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 NAGLUP54802 743 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 KLC3Q6P597 504 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 GDPD4Q6W3E5 623 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 GRIN3AQ8TCU5 1115 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 PPP4R1Q8TF05 950 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 KLHL32Q96NJ5 620 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 CCDC106Q9BWC9 280 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 TRPV4Q9HBA0 871 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 POPDC3Q9HBV1 291 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 VPS9D1Q9Y2B5 631 aa20.15■□□□□ 0.82
RIPPLY3-201ENST00000329553 B2RBV5 119 aa20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 H2AFYO75367 372 aaKnown RBP20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 RBP1P09455 135 aa20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 ZNF37AP17032 561 aaPredicted RBP20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 PGM1P36871 562 aa20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 VHLP40337 213 aa20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 KCNC1P48547 511 aa20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 PDAP1Q13442 181 aaKnown RBP20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 AARS2Q5JTZ9 985 aaKnown RBP20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 ANO7Q6IWH7 933 aa20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 ANKRD54Q6NXT1 300 aa20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 ISCA2Q86U28 154 aa20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 TXNDC5Q8NBS9 432 aaKnown RBP20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 C19orf43Q9BQ61 176 aa20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 HEPHQ9BQS7 1158 aa20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 BRD9Q9H8M2 597 aa20.14■□□□□ 0.81
RIPPLY3-201ENST00000329553 NMRK1Q9NWW6 199 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms