RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ZNF484Q5JVG2 852 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 SLX4IPQ5VYV7 408 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 ZNF470Q6ECI4 717 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 RNF19BQ6ZMZ0 732 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 OTOP3Q7RTS5 596 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 ADCK1Q86TW2 530 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 LYSMD2Q8IV50 215 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 CLYBLQ8N0X4 340 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 RHOXF1Q8NHV9 184 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 TRAPPC12Q8WVT3 735 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 C12orf42Q96LP6 360 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 TEKT5Q96M29 485 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 FEM1AQ9BSK4 669 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 NEK6Q9HC98 313 aa12.73□□□□□ -0.37
CCDC60-201ENST00000327554 SCAF8Q9UPN6 1271 aaKnown RBP12.73□□□□□ -0.37
CCDC60-201ENST00000327554 A0A1W2PP18 115 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.72□□□□□ -0.37
CCDC60-201ENST00000327554 H3BMM5 538 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 M0QX08 132 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 ASNA1O43681 348 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 DYRK3O43781 588 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 SOAT2O75908 522 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 RBP1P09455 135 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 CXCR2P25025 360 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 DNAJB2P25686 324 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 HTR1EP28566 365 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 CASP3P42574 277 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 ZFP36L2P47974 494 aaKnown RBP12.72□□□□□ -0.37
CCDC60-201ENST00000327554 OR4D2P58180 307 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 VBP1P61758 197 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 EMX1Q04741 257 aaPredicted RBP12.72□□□□□ -0.37
CCDC60-201ENST00000327554 FPGSQ05932 587 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 TMEM132BQ14DG7 1078 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 ZNF789Q5FWF6 425 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 KLHDC8BQ8IXV7 354 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 EXOC8Q8IYI6 725 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 PSMA8Q8TAA3 256 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 ANKRD49Q8WVL7 239 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 DPF3Q92784 378 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 GLMNQ92990 594 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 NT5C3BQ969T7 300 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 VPS33AQ96AX1 596 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 YIPF6Q96EC8 236 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 RDH12Q96NR8 316 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 ZNF300Q96RE9 604 aaPredicted RBP12.72□□□□□ -0.37
CCDC60-201ENST00000327554 CYP2S1Q96SQ9 504 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 GMLQ99445 158 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 SMURF2Q9HAU4 748 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 FBXO5Q9UKT4 447 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 PLXNA1Q9UIW2 1896 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 ISPDA4D126 451 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 NOTOA8MTQ0 251 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 AP3B1O00203 1094 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 PPP6CO00743 305 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 PPEF2O14830 753 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 UPK1BO75841 260 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 SPNP16150 400 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 MZF1P28698 734 aaPredicted RBP12.72□□□□□ -0.37
CCDC60-201ENST00000327554 BCAT1P54687 386 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 CDH13P55290 713 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 FOXA1P55317 472 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 TOP3AQ13472 1001 aaPredicted RBP12.72□□□□□ -0.37
CCDC60-201ENST00000327554 PDZD4Q76G19 769 aaPredicted RBP12.72□□□□□ -0.37
CCDC60-201ENST00000327554 BEND5Q7L4P6 421 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 PJA1Q8NG27 643 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 TWIST2Q8WVJ9 160 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 SDCCAG3Q96C92 435 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 FAM167AQ96KS9 214 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 NPY6RQ99463 290 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 SLIRPQ9GZT3 109 aaKnown RBP12.72□□□□□ -0.37
CCDC60-201ENST00000327554 DSN1Q9H410 356 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 TUBB1Q9H4B7 451 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 ACAD9Q9H845 621 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 SPC25Q9HBM1 224 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 PIGVQ9NUD9 493 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 SLAMF8Q9P0V8 285 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 STAP1Q9ULZ2 295 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 PCDHGB1Q9Y5G3 927 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 PCDHGA3Q9Y5H0 932 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 ZSWIM8A7E2V4 1837 aa12.72□□□□□ -0.37
CCDC60-201ENST00000327554 PTGES3LE9PB15 166 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 I6L893 689 aaPredicted RBP12.71□□□□□ -0.37
CCDC60-201ENST00000327554 NCAM2O15394 837 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 MTSS1O43312 755 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 TBC1D4O60343 1298 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 DAB1O75553 588 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 CDK14O94921 469 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 SEC24AO95486 1093 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 NDST3O95803 873 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 JCHAINP01591 159 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 CES1P23141 567 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 FSHRP23945 695 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 GRK3P35626 688 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 OAZ1P54368 228 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 TPD52P55327 224 aaPredicted RBP12.71□□□□□ -0.37
CCDC60-201ENST00000327554 ISL1P61371 349 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 SEMA3BQ13214 749 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 E2F2Q14209 437 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 ANKRD34AQ69YU3 496 aa12.71□□□□□ -0.37
CCDC60-201ENST00000327554 DENND5AQ6IQ26 1287 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms